Ll_transcript_300613

• Id Trinity: TRINITY_DN51509_c0_g3_i2
• Name Transcript: Ll_transcript_300613
• Sequence: TTTGAATTGTTCTAGAACACCCGTATTTTCCCATGCAGTAAAGTAATAGTTATATATTTTTTAGGAGAAAATACTCTGTTTTAAATGGGAAACCCTAATT TCCCAATTTCAAGAATGGAATCCACCCTATTTACAGTTTGGATTCGGATCAATTTTCTGAAATAAATTTCGATTCAATTCTTCTCTTTCTCACAAACCCT ACTTTCCCAATTTCAACAATGGAATCCACCGATACGAAGATCTACAATCTCTTCGTCAAACACTTAAACGGCAAAACCCTAACCCTAAAATTCAAATCCC CCAACATCTCCCCCGATTCCATAAAGCACCGCCTTTTCCACCTCACCGGAATCCCCCCGCACCACCAGCGCCTCCTCACCGGAACCCGCCACTTCTCCGC CGCCGAAACCACCACCACCACCACCCTCTCATGCTCACACAGCAGCAACACCTTCCCCACCGTCCACCTCCTCCTCCGCCTCAACGGCGGGAAGGGAGGG TTCGGATCACTCCTCCGTGGCGCCGCCACGAAGGCAGGGCAGAAAAAGACGAACAATTTCGACGCGTGCCGCGACATGAGTGGTAGGAGGCTGAGGCACG TGAATGCGGAGAAGAGGTTGCAGGAGTGGAGGGAGACGGAGGAGGAGAGGAAATTGGAGAAGGCGGCGGAGGAGTTTTTGAAGAAACAGATGAAGAAAGG GAAGAAAGGGAAAGGTGATGGAGAGGCACATAAGTATGTGGCTAAGTATAGAGAGGAGAGTGATAAGTGTGTTGCTGACGTGGCGCTTTCGGTGAAAGAA GCGTTGATCAATGGTAATAAGGGTAAGAGGAAGGTTGAGGAATGTGTCAAAGGTGATGCTAAGAAGTTGAAGATATGGATGGGGAAGAGAAAAATGAATG AAAGTGACAGTGATTATTCCAGTGGAGAAGAGAATGATGATGAGGGGGTAAAAGAGAAATCTGTTATATTAAATAGCCAGAATGAGTCGGACTCAAACAA GGATGAAGGAAGTTCAGGTTCTGTGACTGATAATAAGCAGCAGGGTGTAGACTCTTCAGGTGCAGGCTCATGTGAAAGTGGATCCGAAGAAGAGAAAAAA ACTGTTGTAGAAGTCAAAGCGGAATCTATTGGACCACAAAGTGCTGATACTGATCAGGTGGAACTGGGTAATGCTGTAGAGCCTGTGTTATGTGATGAGA TGGTGAAGCCTGCAGCTGTGGTTTATTCAGAGTCGGTAGTTTCCGGATTTAGTGCTGAAGATAACGGACATCATGATGCCAATGGGATTGTCTCTGACAA GCTTGATGGATCACTAAGTCTAGCCTCAAATATTACAGGCTCAGAAAATGTGAATGGTGCAATCAAATGTATGGAAGTTGTTCGTGAGAATAAAACATCC GTAAATGAAGAAACCTCACCAAGCATTCCAACATTGGAGGAGCCTTTGAATTTTGATGCTTTTAGTTCAGCTGCAGAACTTGAGGTTCTTGGCATGGAAA GGTTGAAGTCTGAACTGCAATCACGTGGCTTAAAATGTGGAGGTGCTTTGCAGGAGCGTGCTGCCAGGCTTTTTCTTTTAAAATCTACCCCACTGGATAA ACTTCCAAAGAAGCTGCTTGCAAAAAAATGAAAAGTACTTTGAGATGCATCTATCTCTTGAGTTTTCCCTCCTTTGTACAGTATAAGGATAATTACTATA TCTTTTTCTTTAGCAGTGAAGTGTATCTTGGGGAACAGACTAATACTTGCTTTTTCTGTTCCTTCTATTGTTCAATATTTGGAGCATATTTGCCATGACT AAAAGACAAAGGCAACTGAAAAATGTAAAACTTTGTAAGTCTTTGTGTGCTATGAACTCATGTCCTTTTGGATGTAAAATAATATTAGAATCTTTGTGTG GAGTACTGAAATTCCTTGTTACAAC
• Tissue: pods
• Gene name: LI_gene_185449;
• Additional information: details;

Expression of Ll_transcript_300613

FPKM

• PAB: 38.1
• PNAB: 25.1
• PS1: 40.5
• PS2: 28.4
• PS3: 40.7
• PW1: 29.1
• PW2: 31
• PW3: 39

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_300613

• Blastp: Protein SDE2 homolog from Danio with 50.65% of identity
• Blastx: Protein SDE2 homolog from Danio with 55% of identity
• Eggnog: SDE2 telomere maintenance homolog (S. pombe)(ENOG4111WBQ)
• Kegg: Link to kegg annotations (550448)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424115.1)
• Pfam: Telomere stability and silencing (PF13019.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;