Ll_transcript_300307

• Id Trinity: TRINITY_DN51510_c5_g1_i7
• Name Transcript: Ll_transcript_300307
• Sequence: AAAAGAACAAGACAAGAAGTCGAAAGCAGTACGATAATGGAGCGTGCCCTCACTGCTTCTAACTTGAACACTTCTTTCATTCCTTCACGCCAATTTCATT CAACTAAATCAGTATCAACCTTTGTTCTTCCTTCTTCAATCTCTATCACTAACCCTATTCGTTCTTCCATGAAATCCTATCACTTATCGCATCTTACTCA TCCTCAACTTCAGAGCCTTAAGAGCCGACCCCGTATTGATTTTTCTTCAATTTTCAACTTGGTCAACCCCATTGTTGATGATGTTCATAATAGAGGGGAT GCTGCAGTTAAAGAATATACTTCAAAGTTTGACAAGGTTGAACTTGATAAGATAGTTGATCTTGTCTCAGAGCTTCAAGACCCAGTGCTTGATCCATCTA TTAAGGAAGCTTTCGATGTCGCCTACAGCAATATATATGCATTTCATGCTGCTCAGAAGTCACCTGAGAGAAGCGTTGAGAATATGAAAGGAGTCCAATG CAAGAGAGTTGCAAGAAGTATTAATTCCGTGGGTCTTTATGTTCCAGGGGGAACGGCTGTATTACCTTCAACAGCTTTGATGCTTTCAGTTCCTGCACAA ATTGCTGGATGTAAAACTATTGTTCTTGCAACTCCTCCATCTAAGGATGGCACTATATGCAAGGAGGTACTTTATTGTGCAAAGAAGGCTGGAGTGACCC ATATTCTCAAAGCCGGAGGAGCTCAGGCCATATCTGCTATGGCTTGGGGAACAGAAACTTGTCCCAAGGTTGAGAAGATTTTTGGCCCTGGAAACCAATA TGTCACAGCTGCAAAAATGATACTTCAAAACAGCGAAGCCATGGTTTCAATTGACATGCCAGCTGGCCCATCTGAAGTTTTGGTCATTGCCGACAAGCAT GCAATTCATTCTCATGTAGCTGCAGATTTGCTTTCCCAGGCTGAACATGGCCCTGATAGTCAGGTCGTTCTTGTAATTGTTGGAGAAGGCGTGGATCTGA ATGGAATACAGGAGGAAGTCAAAAAGCAGTGCGATAGTCTTCCAAGAGGAGAGTTTGCCTCTAAAGCACTAGGCCACAGTTTTATTGTGTATGCAAGCGA TATGCTCGAAGTGAGTCTCGTTGTCCTAGTTTCTTTCTTTACCCACTAAGAGCAGAGTAACAACTAACAACCTAAGAATAGTGCATTGGAGAAAAAGGAA AACGATTTTTTTCCGGAATTACCACTATAGACTGTTAAGCTTGTATTCTGGATTCTACATAACATAGGTTGTACTTGTACTTGCATGCAGGGGTGTTTAT ATAAGTGTATGTTGCATGAAATATTAGGATTATCTCCTCTAGCTTAAGTCTCAATTCACTTATCGAGTTTTAGAAAGTTTTACATTACTTTTTGCTTCTT CCAGGCTATCAATTTCTCAAACTTATATGCACCAGAGCATCTAATTATCAATGTGAAGGATGCAGAGAAGTGGGAAAGTTTTATTGAGAATGCAGGTTCT GTGTTTTTAGGACCATGGACACCAGAGAGTGTTGGTGATTATGCAAGTGGGACAAACCATGTTCTTCCTACTTATGGATATGCAAGGATGTATAGTGGTG TGTCATTGGACTCATTCCTCAAATACATAACTGTGCAGTCTCTAACAGAGGAAGGTCTTAGAAAACTTGGTCCATATGTTGCAACCATGGCTGAAGTTGA AGGTCTTGAAGCCCACAAGAGGGCAGTTACCCTAAGACTTAAGGACATTGAAGCCAGACAGGTTTCAAGATGAGATAATGCACCAACCATTTTACTATTT ATCTATTGCAAGATGCTATCTTTTTAATTTGTGCCAAGGCTAAAAACTATTTGCTTAATGAGATTACCTGAATTTTATGAAGATTTAGTAGCAAAGCAAT TGACATTCCAAGTCTATGTAACAATAATTGCATTTATGCCAATGAAACTTGATTCTCACGCCACAAAAGAGGTCACCTATAAGGTTTACTTAGTTAAACT GTGAAGTCTGACAGGAC
• Tissue: pods
• Gene name: LI_gene_185459;
• Additional information: details;

Expression of Ll_transcript_300307

FPKM

• PAB: 0.5
• PNAB: 0
• PS1: 0.2
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_300307

• Blastp: Histidinol dehydrogenase, chloroplastic from Oryza sativa with 79.62% of identity
• Blastx: Histidinol dehydrogenase, chloroplastic from Oryza sativa with 79.11% of identity
• Eggnog: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine (By similarity)(COG0141)
• Kegg: Link to kegg annotations (4324282)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425544.1)
• Pfam: Histidinol dehydrogenase (PF00815.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;