| Id Trinity | TRINITY_DN51511_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_299175 |
| Sequence | CTTATTCTCAGTGCACTGTTCTTCTTTTACTCATTTTTTCTTCTCTATTCTTTCATTGAATTTTGAGATTTCAAAAATTCTTCCAATCTTCACATCTCTT CTTTCTATTGCTTCCCCTCTTCTATCACCTCCGAAAAGTTCACAACTTTGTCTTTGTTAGTTGATTTTGTGTGACCCAAATTCCGTACCAAATTCCTTGC TTATTTCAGAAAACATTGAGCTTTATTTGTTGAATGAAGTGGTTTAGCCTTAGAGATTTGGAGCTATGATTGATTCGGAGGTCCCATCTATCTGTTTGTT CTTGGGTTTGCTTTGACGAATAGGTGATCAAGTCCAGGTCTCTTTCTAATAAAGTTTGTGGACAAGTGTTGGTCCGGATGTGTAGTATGTGCCATAATTG TGGTGCATCTTTGACAGAATCAAATGTTGTCAACAAGAAGCTGGGAAATGATAGTAGTTTAAAGTTGAATGAGGAAGTTCTAAAAAATTATTGTAAATTT TGCAGAGAGAAGTTGGAGCGAGAAAATGTGAAGCGGAATAGTACAAGTCCACATTTCACACCAAATATCCGTCCAACTGCATCATTGCTGAGTACTGATA GTTGTGTCTCAACCTGCAGTGACTTTTCTGTTGATGTGAGCTCACCTGACAAAATCAGTCAAGAAGAAAGTACAGTTGAAGGTGTTATGGAAGATCTCAA CTATAAGTTGAATGGGGAATCACAAAAAGTGATGGCAAATAATTCCCAAGAAAGCAATAATGGCAATGAAGGATACACGATGAGAGAGGTGGAGATCCTA CAAGGAAATAACTGCCTCGAAGCAAAAGCTGATGGTTCTGAAAACCCTACTGCATCCTATGCCGAAGAAACTGAATATTCTCTTCCTGATGACTTGGATA CCCAAACTTGGGAACCTCCTGAGCCAGAAAATCCACAGGATGATATGGAAAATAGTGTGACTTGTAATGATGACGATGAAGATGAGGGCATTGGGATTGC AGACTTGGGTGAGCCAACCTTTATGAGTAGTTTTAAGGATGAAGTGAGGTTCAAAGAGGAAAAACAAAGAGCAATGGAAGAAGTAATGAATGGGAAATTC AAGGGACTTGTAGGTCAGCTTCTTAAATCTATGGGAGTTTCCTCTTCCGATGAAGGTGATAAGAGTTGGGTTGACATAGTTACGTCTTTATCTTGGGAAG CTGCTTCATTTTTGAAGCCTGGTGCTATTGGAGGTAATGCAATGAGTCCTGATGGATACGTTAAAGTGAAATGTATTGCAACTGGTTCTTGTAGTCAAAG TGAACTTGTCAAAGGTTTGGTCTTTAAAAAACATGCCGCTCACAAGCATATGCTAACTGAGTACAAAAATCCAAGGTTGTTACTGATTAGTGGTGACGTT GGCCATTCTATTAGTGGTCTGTCCTCATTTGACTCCATGGACCAGGAGAAAGAGTGTCTGAAATCTAAAATGGGTCTTATAGAAATGTGTCATCCAAATG TTATATTAGTGGAGAAAATGGTTTCTCGTGATATACAAGAGTCCATTTTGGCTAAGAGAATGACACTAGTACTTGATATGAAGCTTCATCGTTTGCAAAG AGTTTCTCTTTGTACTGGTTCATCAATTCTATCATGTGATAATTTGAATGGTCAAAAGCTAAGACACTGCAACTTCATTTATTTTAAGAAGTTTGTCGAG GAACATGATGTTGCTGGTGACGGAGGAAAGAGGCCCATCAAAACTTTGATGTTTATTGAGGGCTGTCCTACACGTTTGGGATGTACGATTTTACTGAAAG GAACTCACAGTGATGAATTGAAGAAGATCAAATGTGTCACACGGTGTGCGGTTGTTATGGCATATTACTTAATCCTTGAAACCTCCTTCCTCTTTGACCA GAAAGCAATGTTCTCTACCATTCCTGCTGTGAAATTAGCAGATATCTTGCCAGCCAATCAGGAATCCTTTGGTTCGGCATGTGTTGATTCGATCATCCCA TCTCTTGAGTATTCTACTGAAAATGGTCTAGTTAGTACTGATATTCCAATGTGCAATGGAATTCATGACAAAAGCACAAAGGATTTAAACTTAGAATCAA AAGAGTTTTCCCCATTATCTTTTGAACCATATAATCCAGCTGTGTTTTCTGGGTTCTCAGCCATCTCATCTTCTATGAAGAAAGTTATGGGGGACAGCTT TCCCTTTGCATCTTCTGCTCCTTATCAGTCGCTATCAACATACTTAGGCTTCAATGGAAGGAGACCTGATGATGAGGACAATAAATCAAATTCTATTCTA GACTCTCTGGAGGTAGATGAAAATACCAAGATTGAAGCAAAAGATGATTCTAATGGAGTGAAATTACTTAATGGTGGACAATCCCTGCCCACGCCTGTGC ATTTAGATTCCAACACGCATAAAATTAAAGATGATGACATTGATAGAAAGGAAGTCCAAAGTAAAGATGATATTGATGCCGTGTTGGATTCTCAGAGTAT TTTGGTTTTGATGTCTTCCCGGAACGCCTTAAAAGGGACCATATGCCAGCAAAGTCATTTTTCTCACATTATGTTTTACAAGAACTTTGATATTCCACTT GGAAAGTTTCTCCAGGATAACCTACTCAATCAGACAAGACTTTGCGACACCTGCCAGGAATTTCCAGAAGCTCACTTTTATGATTATGCTCATCATAATA AGCAGCTTACTATACAAGTCAAACAACTGCCTCAGGAAAAATGCTTGTCCGGACAGGCAGAAGGGAAACTTTGGATGTGGAGCCGTTGTGTAAAATGCAA GTCTAACTCAACAAAGCGAGTATTGATATCCACCACTGCTCGTAGTCTGTCATTTGGAAAGTTTTTGGAGCTTAGCCTTTCTCGTTATGCTTCTACCAGA AATTTGAGCTGTGGCCATTCTCTTGATAGGGATTTTCTCTATTATTTTGGGTATGACGAACTACATATCCCCTTTTATAGTACAATACACTGTTAACTTA TGTATCCAGAGTCCTTTTTCTGCTTGTTCCAAGAAGTATGGAAAAAATATAATAAACAAAGAACAAGAATAACAAAGGAGTTTCTTACAAATGATTTGTT GGGCGATAAGTTGGTCAACTGGATTGTTGTGTTCAATTTTGTACTTTTGTTAAGGATGATTTCTATTTTCTACTCTTCCTTTCTCTTTGTAACAACCCAT TTGTCTTAATAAATTTCTTATTTTATGAAAAAATTTACAAAAAAAGTCACGAGTCTTGGTTCAAGGTGAAACCTAGTACCTCTTGATGGCCCAAGTTAGG TGCCTTGCATGGAGGTAGTCTGGGAGCACTGTTGGCACACCTGAAAGGTTCCCGGCTTCACCCTATATCAGCACTCTATTAGGTCACATGGTTGCGATCT TCAGATATTCTCCTGTCACCACTTATACTGTGTGCATGCCTCCTCATATGCTTGAGTTCAGTGGTACCATAGAACAAGAGTGGCTTTCGAAAGAAACTGA GAAAGTGTACATCACAGGCATATCACTGTTCACAGAAGTTGCGAACTGTTTGAAGACAATAAGACTTGATAAATCAACCTTGAACCTTGGAGGATCAATA AGAGAGTTCTCTGAGGTTGAGATGATGTTGAAGCAAGAGCGAGAACAATTTGAGGTAAACATCAAGAATGCTGTTTTTAAGAAAGGGGATCCGGACCAGG ATGTCTTCAAATTGCTCAGTCTAAACCGATTGATGTGGGATCTTCTGGTTGAATCATGTGTGTGGGATCGGCGCTTGTACTCATTACACTCACATGACCG TTTAAGAAGTGAATCTAATATCTCTGAAAAAGTTATGCAAGAACATGGTTATTCAAAAGTGGAAGGCACTGCTGGGAGAGAAATTGCATCTACAGGTAAT GTAATGGCAAATAGCAACATTAATGGGGGTGCCAATGTAGAAATCTTGTCGGAAACATCCCTGGAAGTGAATGAACTCCCAACAAAGGAAATTCCTATAA GTGTATCACTTCTCGAGGGCAATGAACAGGACGTCCCACAGCATGTGAAGATTCCGGTTGTTGACGATTTGAGATCAAAGAAATCTCCTGACAAGAAGTT GAACTTGAGTATTGATGTTTTCACTCAGTCCCCTTCAGAAGGTGGCAATCTCCTGGATAAGGATTTTGTCACATCGAACCATCTTCAAGTTGAATCTACA GACATTCAAAGCAGCCTTCCAGTTAATAATAGTGCTTCACTGCATTCACCAGTTTCCAGTTTGCAGGACTCAAATGAATGGTTCTGGAAGCCATTTGCTG ACATTAGGCAGATAGGTGTAAGGGACTTCCAGAAAACATTCTTGCCAAAATTTGAATCTTTAAGCAGTTCTATCACAGAATATCTACCAACAGCCAATCA ATTAATCATTGAGGAAGGTACAAGGTTGCATATCCCTCTCAGGACAGATAATCATATTGTCTCTGACTACGAGGGTGAACCCTCAAGTATCATTGCCTGT GCACTGGCCTTCTTAAAAGATTCATATGCAGTGACAGAACTTGATGAAGATGATAGTAGAGAAAATGGAGTAACTTCAACATCAATAGAAAGTTTGCATG GCTTTATCCATGGTGCTACCTTAACTTCTCCACACACATTTTCAAGTTCGACAGATTCTGATTCTGTGCATTCTATGGGAAGCACTTCTTCAGAAGAGTC ACTATCCTCTCGTTCTCTAGAAAACCATAGTGGCGTAGAGATTGCTATGGGGTATGCAAAATCACTTGGGAAGGAAAAATATACAGTGATTTGTCATTAT GTTAACCAGTTCCGTGAACTTCGGAATTTGTGTTGCCTATCTGAGCTTGACTATATTGCTTGTTTAAGCCGCTGTAGGAATTGGGATGCTAAAGGTGGAA AAAGCAAGTCTTTTTTTGCAAAAACATTTGATGACAGGTTCATCATAAAGGAAATTAAGAAGACAGAACTTGATTCATTTTTGGGGTTTTCTTCTCGGTA TTTCAAACACATGAGGGAGTCATTCGAGTCTGGGAGCCAAACATGTCTTTCAAAAGTCTTAGGAATATATCAGGTTACTAAAAGACATATCAAAAGTGGA AAAGAGGTTAAACACGACCTCATGGTGATGGAAAACCTTACTTACAATCGAAATATTACTCGCCAGTATGATCTTAAAGGTGCTCTTTTTGCTCGGTACA CTTCTGCTGCTGATGGTGCTGGAGATGTTCTTTTGGATCAGAATTTTGTGAATGACATGAATTCTTCCCCATTATATGTCAGCCATAAAGCAAAGCGTCT TCTTCAACGGGCTGTTTGGAATGATACAACTTTTCTCAATTCAGTAAATGTGATGGATTACTCCTTACTTGTTGGAGTAGATTCACAGAAGCGCCAGCTA GTTTGCGGGATCATTGATTTTCTGAGGCAGTATACCTGGGACAAACATCTTGAGACATGGATGAAGTCTTCACTTGTTGTGCCCAAGAATGTGTTGCCAA CTGTAATCTCTCCAATAGAATACAAGAAGAGGTTCAGAAAGTTTATGTCTACATATTTTCTGAGTCTTCCAGATCATTGGTGCTCTCAGAAATCCTCCAA TCCATGCAAACTTTGTGGCTCTGAGGAAGATGGCCCTTCCCAACAAAGTTCCTAGCACAAGGATGTCAAATGATTTCTCTTAATATTTTGATTTAATTTT TCAAAAGTTCATAAAAATTGAGAATTTATGCAACTACTTACCATTGTATATATATAGAACCAATATTGTTTATAAACTTAGCCCTGTAATTCTGCCATTT TTAGCGGATTCATAGGGATGTTGTCATTTCTACATACCCAGCATGAGATGACTAATATTTTTGTAAAGCCTAAGCAAAATGTAAAGCTTTACTTTGAATC AATGAAAACTGCAGTTGGCTTTTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_185468; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_299175
| Blastp | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D from Arabidopsis with 49.63% of identity |
|---|---|
| Blastx | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D from Arabidopsis with 46.94% of identity |
| Eggnog | Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (By similarity)(COG0459) |
| Kegg | Link to kegg annotations (AT1G34260) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452735.1) |
| Pfam | TCP-1/cpn60 chaperonin family (PF00118.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |