| Id Trinity | TRINITY_DN51522_c0_g1_i18 |
|---|---|
| Name Transcript | Ll_transcript_300729 |
| Sequence | CAAAGGCCCCAGGCAGCACTAAGTTCTCTTCCCCCATTTTTGATCCCTATCAACTCTTTTCTCATTATCTTCCATTGTTCCAACCTAAGACAAAGAAAAG AACATGGCTCATTCATTATTAAGAAAATCAATTCCCAATTCCTTAAACCCTAATTTTCTGACAGCACTCTCACGTAACCCGATTCGCCAGCTCACCTCCA CCGCCGCCGCCGCACAGCAATCAGACAGTTCACCGTTCACCTTCTCGTCCGGCGGCGGCGGCGATCAGAAGAACGATGAGAGTGTTCATTTGAAGGGCCC TCCGAAGTGGAAATCGGTGACGATGCCAATGTCGTTTATGACAGGATCAATTGTAGGGAAGAGATTCTATAAGGAAGTGAAAACGAGAGAAGGTGATGAT GGAAATGGATGGACAGTGTTATTGGATTATAGAACTCTTAAGACACCTTCTAAGAGACCGCTTAAGCTTCCTACTCTCTCACTCGCTAAGGCCATTGCTG CTGAATGGGATTATCAGCAAAAAGATGGCATAAGACCCTTCACAATGCCTCTTATGAGACTTGCTTGTACCGCATTGGAAAGAGTTCCACTCACAAGGAC CAAAATTATTCAGCATTTGATGCACAAATTTAATCAAGATTTAGTATTTGTTCGTGCTCCCGACGATAGTGATCTCACAAGCTGTGTCCATGACTCCCCC AACTTCTAGAATGTGTTCGCATAAAACCTGGAATAGGCCTTTATATGAGAACCAGAACCAACATCACCAGCCGGATTCCACCATTAGCGCCGCCGCCGCC GCTGCCGCTACTGTACCCTTTATCTATTATATGCTCTCTTCATCTGGCTCTCACTTTTTGAAGCTTTACCAACCACTAAGGAACCACCATTCTACCACTC TACTCGTGGAGAAATTGCTTCTTCGTTCTCTGTTGTTGTTTGGCTGCAATGGTACCCACGTAAAAAGTAGCTGGCATATTGGTGCACTTGTTGAATGTAT AGGTAATAAGAGACACTTTAGTAGCAATACTCCTGCTCTGGTCACTGGAGGACATAATAATAGTAACCATGCTCCTATTGTCCCCTCCAGAAGTTCGGGA ACGGGTTCTAGTTTGTCAAAATTCACATCTGGTGAAACCTATTCAGTCCTTCAAGCACCCAGTCTTCAACACTGGTTTAAAAACTGGCAAATGTGTAGGA AACACAAGCTGACAGCCAGTACTTTTGCTAGTGCTATTGGGTTTTGGCGTCAGCGAAGGGTCCAACTTTGGTTAGAGAAGATTGGTGCTATTGAACCATT CTCTGGAAACCTTGCCACCTGTTGGAGCAATATCAAAGAGGAGGAAGCACTTGAAAGATACAAACTGATCACTGGAAATACTGTATTGTTTCCCGAATTT CAGGTTTACGGTGGAGACTCAGAAGATGACTGGTTAGCTGCTTCACCTGATGGTATAGTTGACAGCCTGGTATATGAGCTGCCTTCTCGTGGAGTACTAG AGATAAAGTGTCCATATTTCAATGGAGACATGAGTAGAGCGTACCCTTGGTCGCGAATTCCAGTTCACTATATTCCTCAAGCTCAAGGATTAATGGAAAT TCTAGGAAGGGATTGGATGGATTTTTATGTTTGGACTCCTCATGGTAGTAGCCTTTTCAGGATAGATCGGGATGCAGAGTATTGGTATGTAATGAAAATG GCACTATCTGATTTTTGGTTGAAGCATGTCCAGCCAGCGAGAGAGTTGTATAGTAGTAATGTCATAAAAAATCCTCTTTATGAATTAAGATCACTGAGAC CAGCTCCTAGGCATGAATTATGTCGCCATATAGTTCATGAAAGCAAATGCATTGTTGATAGTTCAAAGTTATTGATTCGGGAAATTAATGGGAAACTGTA TAATTGATACATCTACATGTTAGAGGGGAGTCATTTGTCAGTGTAGTGAGAAATTCGTTATTATGGATTACATAACACTCGGAGTTGTTAGTCTAAATCA ATATAGCTTACAAAGAAGTTGATTTTGCAGAAGGATGATAGTATCAATATGTGATGCTTATTATGGAACCTTCTATGAGAAGAGATGTAGATTTTAAGAT TTGTTTGTTTAATATGAGAATTTGGAGCTGGAGAGAAGAGACAGACAAACTTCACAGGATATAGAACTTCACAAAATTGAGACATTTGATGCAGAGAAAG TGGATATTTTGACTACAAGTATACCTCTCGATTTGCTTCAACTTTTTTTGGTGGGTAACTGAGCATGCAGGACTATATACCAGTTGTCTTCCTCTCTTTG GTTTTGCCTAAGATTAATACTATTTCTCCTCTTCTCATATTCGGAGTAACCCATTTAGACTTCAGCGAGATCGTCAAGTGGAGAAAATTGATCCTCTTCT TCACTGGTTGGAGTCAGAATTTGGCTTTAAGCCTGTTGTGTACTCCAGCATTTTTGGCGGAAAGCAAGAAGACGGTCTCGTAACAGCTATAGAGAACTTT CTAAAGAAAACTGATGACTGTGAATTGGCAACAATTGATGCTATTGCATCAGCAGGACACTCACTAACTATTGCTATTGGAATGGTGCTTGGGAAATTGC AAATCGAGGAAGCGATTGAGCTTATTAGACTTGAAGAAGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_185552; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_300729
| Blastp | - |
|---|---|
| Blastx | ATP synthase mitochondrial F1 complex assembly factor 2 from Homo with 36.11% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439313.1) |
| Pfam | YqaJ-like viral recombinase domain (PF09588.9) |
| Rfam | - |
| GO | - |