| Id Trinity | TRINITY_DN51528_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_299850 |
| Sequence | TTTCAAACCATCAAATCTTCGAATAAGTTTCTCTTTTCAATTCATTTTCTCTAGCTCTCTTATTTTCCAATTCCCATCATTGTCCGAAAGATACACACAC AAAAATCAATCACTTTTCAACAACAATGGCGGATAATCACTCAGCTCCCGAATTGAACAACGGTGCATCTCACGCTCACGGCGGCGCTGACCATGGCTGG CAGAAGGTAACCTACGCAAAACGACACAACAAGAAGACAAACGACAACAAAGCCGTCGCGAATTCTGACAAGCTTCTCCCAAATGGCACGTTATCCGGCG GAGACGGCGTTTTCAAGTCTCTGGAGCTGCATTCGGAGGACCGGCGCCGGAGAATCGCGGAGGCGAGGAGGGCGGCCGATGCTGAATTTGATGACGATGC TCCGGTTAGATCGAAGCAGCGTCGTCACAATGAGTATGATGATGAAGATAACGATGATGAGGTGGATCTTTCTGCGGAGAATGGGAAATCGGAGGAGGTG AAGAAGGTGAAAGCTAAGAAGCCGAAGAAACCTAAGGTGACGGTTGCGGAGGCCGCCGCGAAGATCGACGCTGCTGATCTGGGAGCTTATTTAGTTGAAA TATCGGGATCTTATGAGACGCAGCAGGATATACAGTTGATGCGTTTTGCAGATTATTTTGGACGTGCTTTTTCTGCTGTGAGTGGTTCTCAGTTTCCTTG GGTGAAATTGTTCAGAGAATCCACCGTGGCTAAGATTTCTGATGTGCCACTTTCTCACATATCTGATGCTGTATATAAGACATCAGCTGACTGGATTAAC CAACGTTCTCCTGAGGCACTTAGTTCGTTTGTGCTTTGGTCTTTAGACAGCATTCTCACTGATTTGGGGAATCAGGTAACTGTGTCTAAGGGTTCCAAAA AGGCTGTGCAACAAGGAACTTCAAAATCTCAGGTTGCGATATTTATTGTTTTAGCGATCGTATTGCATCGGAAGCCTGATTCTCTTATTGCTTTGTTGCC CACATTGAGGGAGAATACTAAATATCAAGGGCAAGATAAGCTTACAGTGATTGTATGGCTGGTAGCTCAGGCTTCACTAGGAGATCTCTCAGTGGGCTTG TATGCGTGGGCACGGAATCTCCTACCTATAGTGAGTAGCAAAAGTGGTAACCCACAATCAAGGGATTTGATTTTGCAGCTAGTGGAAAAAATTTTGTCTA CCCCTAAAGCACGGCCTATTTTAGTGAATGGTGCTGTAAGAAAAGGGGAACGATTAATTCCTCCTTCTGCATTTGAAGTTTTGCTGCGTGTTACATTCCC TCCATCTTCAGCTAGAGTAAAGGCTACCGAAAGATTTGAGGCCATATATCCCACTCTCAAAGAGGTGGCTCTTGGTGGTTCACCTGGAAGTAAGGCACTG AAACAAGTTTCACAGCAGATATTCAATTTTGCTATCAAAGCAGCAGGAGAAAAAAATCTGGAGTTATCAAAAGAAGCAGCTGATATTTTTATTTGGTCTT TGGGCCAAAGCACTGAATCCTACAAGCAATGGGAAAAAGTTTACGAGGACAATATTGAAGCAAGCGTTGCAGTTTTGAAGAAGCTCTCTGATGAATGGAA GGTGCAATCAGCAAAATTGTCTCCTTATGAGCCACTGAGGGCGACCCTGAAGAATTTTAGGCATACGAATGAGAAAGCATTGGCTACTGGGACAGATGCT GCTCACCAAGCACTCTTCAAGGATGCAGATAAATATTCTAAGTTGATCTTAGGAAGAGTTTCACAAGGCCATGGGTGTGTGACATGTTTGACCTTCACAG TTCTAGTAGCGGCGATCGGCGGTGCTTTCGTGCTGTCTCCAGACTTGGCAGAGTATTTGGATTTTAAGAAGCTCCCTTTAGTTTTCAACTCTCAGTTTTG AGCACTCTTCGTAGAATGTTCTGCACTACTGGCAGTTGGTTGTACCAAGCAGGGATTTTCATATGGGCCTAGCCCTTTCGAAATGGGTATACCCACTAGT CAACTGCTTCGGAGTAAAATGCAGATAATGGGGAGGGAGGTTGTACACTTAGTTCAAATGACAAATAATAGTTGCGGTCAACAATGGTTGAGGTTTACGT TAGTTTGACCTTGTTATAATTTATTTGATGTTCTTGTTTCTGTTGAGTCTTTAAAGTTTAGTTATCCTATGGCTTTACATTAACGGTTCTGGAAAAGTGC CAAAGAGGTAACTACACTTGTATTCTGGACTCAGTTTAGTTATAAATTAAAGGAATTTTGATGATAATAGTGCAAATTTTTCTGTAGATTTTTCGATGTT ATCATCATGCCTTTTGTCCTTCTTCCTTGTTTTTTTCTGTTTTTCGATTTTTTTACTCTTCTAATTGAGCAGTATTTTTTAAGCCTATCAGTACAAAACA GGAATATATGATTGCTTTGATTGAAAAAAAGAAATGAATAATTGCTTTCAGTAGTTCATAGGCGCTTGCTTTGTAGGCTAATCTTCTGAGACACTATTTT ATAATTGTTTAGTCACATTTTTTTTATTAAACATTATCCGAAATTTGGCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_185598; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_299850
| Blastp | Transmembrane protein 214-A from Xenopus with 26.77% of identity |
|---|---|
| Blastx | Transmembrane protein 214-A from Xenopus with 26.77% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (779351) |
| CantataDB | Link to cantataDB annotations (CNT0000596) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445834.1) |
| Pfam | TMEM214, C-terminal, caspase 4 activator (PF10151.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |