Ll_transcript_299852

• Id Trinity: TRINITY_DN51528_c0_g1_i12
• Name Transcript: Ll_transcript_299852
• Sequence: GGATAGAAGAATATCAATTTCAAATCTTTAAATAATTTTCTCTATTCAATTCATCTTCTCTACCTTTCTCTTATTCTCTAAAAGCAGAAAAAATCAATCA ATCAATTCTCAACAACAATGGAGGATAACCATGGCTGGCAGAAGGTAACATACTTGAAACGACAGAACAAGAAGATTTCAAACGACACCAAAACCACCGC CAATTCCGATAAGCTTCTTCCTAACGGCACGTTATCCGGCGGCGACGGAGTTTTCAGGTCGCTGGAGCTGCATTCGGAGGACCGTCGCCGGCGAATCGCT GAGGCTCGGAGGGCGGCTGATGCTGAATTTGATGATGACGCTCCGGCCAGATCGAAGCAGCGACGTCGCGATGACTATGATGATGATGATTACGATGATG AGGTGGATCGTTCCGCGGAGAATGGGAAAGAGGAGGAGGTGAAGAAGGTGAAAGCTAAGAAGCCGAAGAAACCTAAGGTGACGGTTGCGGAGGCCGCGGC GAAGATCGATGCTGCTGATCTGGGGGCTTATTTGGTTGATATATCGGAATCTTATAAGACGCAGCAGGATATACAGTTGATGCGTTTTGCTGATTATTTT GGACGTGCTTTTTCTGCTGTTAGCGGTTCTCAGTTTCCCTGGGTCAAGTTGTTCAGGGAATCACCGGTGGCCAAGATTGTTGATGTGCCACTTTCTCACA TATCTGATGCTGTGTATAAGACATCAGCCGACTGGATTAACCAACGTTCTCCTGAGGCACTTAGTTCGTTTGTGCTTTGGTCTTTAGACAGCATTCTTAC TGATTTGGGTAGCCAGCTAACTGTAGCCAAGGGTTCCAAAAAGGCTGCAAAACAAGGGTCATCAAAATCTCAGGTTGCAATATTTATTGTTTTAGCAATG GTATTGCGTCGGAAGCCTGATTCTCTTATTGCTGTGTTGCCCACATTGAGGGAGAATACTAAGTATCAAGGGCAAGATAAGCTTACAGTGATTGTATGGA TTGTAGCTCAGGCTTCACTAGGAGATCTCTCAGTAGGTCTGTATGCTTGGGCGCGGAATCTCCTACCTATAGTGAGTAGCAAAAGTGGTAACCCGCAATC AAGGGATTTGATTTTGCAGCTAGTGGAAAAAATTTTGTCAACCCCTAAAGCACGGCCTATTTTAGTGAATGGTGCTGTAAGAAAAGGGGAACGATTAATT CCTCCTTCTGCATTTGAAATTTTGGTCCGAGTTACCTTCCCTACATCTTCAGCTAGAGTAAAGGCTACTGAAAGATTTGAGACAATATATCCCACTCTCA AAGACGTGGCTCTTGGCGGTTCCCCTGGAAGTAAGGCAATGAAACAGGTTTCACAGCAGATATTCAGTTTTGCTATCCAAGCAGCAGGAGAAAACTATCC GCAGTTATCAAAAGAAGCAGCTAATATTTTTATCTGGTCTTTGGGCCAAAGCACTGAATGCTACAGGCAATGGGAAAAAGTTTATGAGGACAACATTGAA GCAAGTGTTGCAGTTTTGAAGAAGCTCTCCGATGATTGGAAGGTGCAATCAGTAAAGCTGTCTCCTTATGAGCCACTGAGGGAGACCCTAAAGAATTTTA GGCAAAAGAATGAGAATGCATTGGCTACTGGGTCAGATGCTACTCGCCAAACACTCTTCAAGGAGGCAGATAAATACTCTAAGCTGATCTTAGGAAGAGT TTCACGAGGCCATGGGTGTTTGACATGTTTGACCTTCACAGTTCTTGCCGCGGCTGTTGGTGCTGTCGCTCTGTCTCCCAACCTGGTGGAGTATTTAGAT TTTAAGAAGCTCTCTGTAGCTTTCAACTCTCAGTTTTGAGCACTCTATGGAGAATGTTCTGCATTTCTGGCAGTTGGTTGCACCAAGCAGCAATTTGAAA TAGGCTTAGCCCATTCAAAATGTGTATACAGTATAGACCAATTGCTTCATAATAAGGTGCAGATAACGGTGAAGGATGTTGTACAATTAGTTCAAATCCT GTTCAGATGACACAGAATAGTTGAGGTCGACAATGGTCGAGATTTACTTTAGTTTGGCCATTTTATAATTTTTTATTTTTTATGTTTCAGTTGAGTTGTT TAAAGTTTAGTTATCTTATTTATGTCTTTACATTAACCGTTCTGGCAAAGTGCCAATCAGGAAAGTGCACTAGTATTCTGGACTTAATTTAGTTTAATTA AAGGAATTTTGATGACAATACTGCAAATTTTTCTCCAGTTACTTTTTACTGTTATCATTTATTTTCCTGTGTTTTCCATGTTTTCATTTCTTTCTGGAAA ATTTGTTTAGCATATCATATGGTCGATACAAAGTGTAGGAGG
• Tissue: pods
• Gene name: LI_gene_185598;
• Additional information: details;

Expression of Ll_transcript_299852

FPKM

• PAB: 3
• PNAB: 5.7
• PS1: 2.8
• PS2: 5.7
• PS3: 3.9
• PW1: 2.2
• PW2: 3.4
• PW3: 1.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_299852

• Blastp: Transmembrane protein 214-A from Xenopus with 26.48% of identity
• Blastx: Transmembrane protein 214-A from Xenopus with 26.48% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (779351)
• CantataDB: Link to cantataDB annotations (CNT0000596)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464127.1)
• Pfam: TMEM214, C-terminal, caspase 4 activator (PF10151.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;