Ll_transcript_299845

• Id Trinity: TRINITY_DN51528_c0_g1_i5
• Name Transcript: Ll_transcript_299845
• Sequence: CCCTTTTCATTTTCAGAAAAGAAACATAGACACAAAAAAAGAAGCAATAACTTTTCAACAACAATGGAAGATAATAACTCAGCTCACGAATTGAACGGTT CCGTCACCGCTAACGGCGGCGCTGACCATGGCTGGCAGAAAGTAACCTACGCAAAACGACAGAATAAGAAAAAGCCAAATGACACCAAAACCGTCGCGAA TTCCGACAAGTTTCTTCCAAATGGAACTTTATCTGGCGGCGACGGCGTTTTCCACTCGCTGGAGCTGCATTCGGAGGAGCGGCGCCGGCGAATTGCCGAG GCGCGGAGGGCGGCTGATTCTGAATTCGACGATGAGGCTCTTGTTAGATCGAAGCAGCATCGTCGCGATGATTATGATGATGACGATGATGAGGTGGATC ATTCTGCGGAGAATGGAAAGGTGGAGGAGGAGAAGAAGGTGAAAGTTAAGAAGCCGAAGAAACCTAAGGTGACGGTTGCGGAAGCTGCGGCGAAGATTGA CAGTGATGATCTGGGGGCGTTTTTAGTTGATATATCGGGATCGTATGAGACGCAGCAGGATATACAGATGATGCGGTTTGCAGATTATTTCGGACGAGCT TTTTCTGCTGTGAGCAGTTCTCAGTTTCCATGGGTGAAGTTGTTCAGAGAATCAACTGTGGCTAAGATTGCCGATGTGCCACTTTCTCACTTATCTGATG CTGTATATAAGACATCAACCGACTGGATTAACCAACGTTCTCCTGAGGCACTTAGTTTGTTTGTGATTTGGTGTTTAGACAGCATTCTTGCTGATTTAGG TAGCCAGCTAACTGTGGCCAAGGGTTCTAAAAAGGCTGTGAAACATGTGGCTTCAAAATCTCAGGTTGCGATATTTATTGTTTTAGCGATCGTATTGCAT CGGAAGCCTGATTCTCTTATTGCTGTATTGCCTGCACTGAGGGAGAATGCTAAGTATCAAGGGCAAGATAAGCTTACAGTGATTGTATGGGTGATTGCTC AGGCTTCACTAGGAGATCTCTCAGTAGGTTTGTATGCATGGGCACGGAATCTCCTACCTATAGTGAGTAGCAAAACTGGTAACCCGCAATCAAGGGATTT GGTTTTGCAGCTAGTGGAAAAAATTTTGTCTACTCCTAAAGCACGCCCTATTTTAGTGAATGGTGCTGTAAGAAAAGGGGAACGATTAATTCCTCCTTCT TCGTTTGAAATTTTGGTCCGGGTTACTTACCCTCAATCTTCAGCTAGAGTAAAAGCTACCGAAAGATTTGAGGCCATATATCCCACTCTGAAAGAGGTGT CTCTTGGTGGTTCCTCCGGAAGTAAGGCAATGAAACAAGTTTCACAGCAGATATTCAATTTTGCTATCAAAGCAGCAGGAGAAAACAATCCAGTGTTGTC AAAAGAAGCAGGTGATATTTTTATTTGGTGTTTGGGCCAAAGCACTGAATGCTACAAACATTGGGGTATAGCTTACCAGGACAACATTGAAGCGAGCGTA TTAATTCTGAAGAAGCTCTCTGATGAATGGAAGGTGCAATCAACAAAATTGTCTCCGTATGAGCCACTAAGGGAGACCCTAAAGAATTTTAGGCAAAAGA ATGAGAAAGCATTGGCTACCGTAACAGATGATGCTCGCCAAGCACTCTTCAAGGACGCAGACAAATATTCTAAGCTGATCTTAGGAAGAGTTTCAGGAGG CCATGGGTGCGTGACATGCTTGACCTTCACAGTTCTTGCTGCAGCTGTGGGTGCTTTCGTTCTGTCTCCCAACATGGTAGAGTATTTGGATTTTAAGAAG CTCCCTTTAGTTTTCAACTCTCAGTTTTGAGCACTCTTCGTAGAATGTTCTGCACTACTGGCAGTTGGTTGTACCAAGCAGGGATTTTCATATGGGCCTA GCCCTTTCGAAATGGGTATACCCACTAGTCAACTGCTTCGGAGTAAAATGCAGATAATGGGGAGGGAGGTTGTACACTTAGTTCAAATGACAAATAATAG TTGCGGTCAACAATGGTTGAGGTTTACGTTAGTTTGACCTTGTTATAATTTATTTGATGTTCTTGTTTCTGTTGAGTCTTTAAAGTTTAGTTATCCTATG GCTTTACATTAACGGTTCTGGAAAAGTGCCAAAGAGGTAACTACACTTGTATTCTGGACTCAGTTTAGTTATAAATTAAAGGAATTTTGATGATAATAGT GCAAATTTTTCTGTAGATTTTTCGATGTTATCATCATGCCTTTTGTCCTTCTTCCTTGTTTTTTTCTGTTTTTCGATTTTTTTACTCTTCTAATTGAGCA GTATTTTTTAAGCCTATCAGTACAAAACAGGAATATATGATTGCTTTGATTGAAAAAAAGAAATGAATAATTGCTTTCAGTAGTTCATAGGCGCTTGCTT TGTAGGCTAATCTTCTGAGACACTATTTTATAATTGTTTAGTCACATTTTTTTTATTAAACATTATCCGAAATTTGGCG
• Tissue: pods
• Gene name: LI_gene_185598;
• Additional information: details;

Expression of Ll_transcript_299845

FPKM

• PAB: 4.2
• PNAB: 8.2
• PS1: 12.1
• PS2: 9
• PS3: 8.5
• PW1: 8.9
• PW2: 4.4
• PW3: 2.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_299845

• Blastp: Transmembrane protein 214-A from Xenopus with 24.49% of identity
• Blastx: Transmembrane protein 214-A from Xenopus with 24.49% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (779351)
• CantataDB: Link to cantataDB annotations (CNT0000596)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445834.1)
• Pfam: TMEM214, C-terminal, caspase 4 activator (PF10151.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;