Ll_transcript_298821

Id TrinityTRINITY_DN51534_c0_g1_i8
Name TranscriptLl_transcript_298821
SequenceTGACAGTACATCCTATGTTCCCAGAATTGTTCGAGAGTTTGTCTAGAACAGCGACAGATCTTAGAACCATACACTCCCACACTGCACCTTCTCTGTCTCT CTCTCTTCTATGCTGTTATAAGTTCTAACCCCTCTGTTTCTCTCTCTTCTACTGATAACTATCGTTTTCTTTCTAAAGAGTGAGACCCTCGTGAAGTGCA TGTGAAGCTTGCTCAGTGAGAGATCCACCACTTAATAATTCATCCAAAAGGGTCACCTTCCCTTTTCTGATTCAGGTGATTTAAGTGCTTCCCTTCTACC TTTTCTCTTCTACTACTTTCTATTTCCACCCTTACTTTCCCTTTTACATCATCCTTTTTTTTTCAAACCAGTGAGGGGTTAGTACTTTGGTTCCACTTCA GATTTTTGAGATAATGGGGTCTTAACTTCTTCTCTTTTGTTTTCATTTCTAGTCTCAAAATTGTATCTTGTTGGGTCTATAGTTGCTTCTTGGGGTAGCA GCACTTTCTAGTTATGTGCACAAAGTTCATTCTTTTCAATCTCAGTTTGGTGGGAAGTTTTGTTTTTAATGGCTTTTTCATCTTGAAGGGTGTTATAGCT TATTTAATGGGATAATTGACCATGAAACTCGTTATTTCCCTTTTTGCAAGTTGAATTCTAGCCTTACATTGTCATTTGCTAGTAATTAATGGGGGTTCAA GATTGAGCATTTTTCCCTTTACTGTCGTAATTGTTAAAATTTGGCTAAGTTGTAGGCAAAAAAGTGCATTTTTCTGATTTGTTTCTTGAATTTAGAAGAG ATTCTACTGTCAGAAGGGTTGATGTTGTGAACATGACTAGGGCTGTTCGCAATAGGGTACTGAAGGATGCCAATGGTGACATTAGTGACCATCTCCGCAA TCATATCCATTTAACAAATTGCATTCACTTGAAGAACCATATGCACAAGAACAGTCCCATACTAGCTGATAGGACACTCATGAGGGACCTTGTTGTGCTG CAGAGATCGCGCTCTCTCAGGGACCCTTCTGCGAGTCCTCCATCGTGGCATTCACCTTCAGTAGTTGATTTGCTTTTCAAGAGTGCTGAAAATGATGCCG TGATTCAAGAGGGAAGAAGGTCTGTAGGTGTCGAGCGCAGGAAGGGAGGGAGAAGGTTGTCCAGAAATTCACCACCCTTGGCGAGTATAGGTACATCAAG GGTTGCTCCAGGTGATGCTAGTGTTGGTAATGATGGGGTAGCCGCAACTAGTGAACGTAGTAGCAGGAGTGGAGTGGGGAATGGGAGGAGAGTTGCGAGA GAAGATTCGGGTAGGAAGAGTGATAGGCCTGATTATATGGATGTAAGTCAAGCTGGCAAAAGTTTGGCTGAAGATGTTATTTCAAGGCACTCTGCATCAA GCAAACAGAGGGGGAAGAATGTTCAAGCAAAGACACTTTCTGAGCAGTTGAATGATTTTCCATTGGAAAGTGACGATTTGGCATCATCAAACATGCATGT TCGTGGAAAGTTTCCGAGACAGGAGAAAAATAGTGAGGAGGCAGAAACCAGCATCCGTGGTCATGGATGTGGAGTGAATAGGGGTAAGAGGCGGAAATTT CGAAGCACAAGAAGAACTCGAGTTGGTACAGCATCGAGAGATATTGGAGCCGAGAATGAATTGTCTGTGGCTTCCAACTCATTGCCTAATGGTTCAGCTC ACCAGAAGTATCACATGGAGAAGGCTGATGACTGCATAGATCAAAATGTTACTAGGGCTCCAAAAAATGGGTGTGGTATTCCTTGGAATTGGTCCAGAAT TCATCATAGAGGTAAATCATTCCTTGACATAGCAGGAAGAAGTTTGACATCTTGTGGTTTATCTGACCCAAGGTTAAAGAAAGGGACATTAACCACCAGT GGAAAAAATATTCCGGAGCGACCTGTGGCATCTGAGTACTCAAGCTCATCTACAAAATCTGATGCAGAAGCACTGCCTTTACTTATTGAGGGATCTAGAT CTCATGGAAGCACTGAAAATGTTTGTTGGGACCATGAATATTCTGGGGAACTAGCTCTTTTTGGTAATAATTTATTCAAGCATGATATCGATTCCGACCT TGCCTCTGAAGCTAGATCCGTTGACCAGCATAAGTTGAGAGGGGATAGTCATAGTAGACATCAAAGCTTAACACAAAAATATATGCCACGAACCTTCAGA GATATGGTTGGGCAGAATTTAGTGGCACAAGCTCTTTCAAATGCAGTGATGAGAAGGAGAGTCGGACTGTTGTATGTGTTTTATGGTCCCCATGGCACTG GAAAAACTTCATGTGCTCGCATATTTGCCAGAGCTTTGAATTGTAGTTCTTCAGAACACCCAAAACCTTGTGGCTTTTGCAACTATTGCATTGCACATGA CATGGGTAAGAGTAGAAATATAAGGGAAGTTGGTCCGGTCAGTAATTTTGACTTTGAGGGCATCATGAATCTACTTGACAATATAACCGTTTCCCAGCAT CCATCGCAGTACAGAGTATTTATTTTTGATGAATGTGATACTCTGTCGGCTGATTGTTGGAATGCTATATCAAAGGTCATTGATCGAGCACCTAGACGCT TGGTTTTTATCCTTGTCAGTTCTAGTCTTGATGTCTTGCCTCATATAATAATATCCAGGTGTCAAAAATTCTTTTTCCCGAAGCTGAAGGACGCAGATAT TATACATACATTGCAATGGGTTGCAACCAAAGAAGGTCTAGAAATTGATAAGGATGCCCTGAAACTCATTGCCTCAAGATCAGATGGATCATTGAGAGAT GCTGAGATGACCCTTGAACAACTTAGTTTGCTTGGGCAGAGAATATCGGTTCCTCTTGTTCAAGAACTGGTAGGGCTTATCTCTGATGAGAAATTGGTTG ATCTGCTTGATTTGGCATTATCTGCAGACACAGTCAACACTGTCAAAAATTTGAGAATGATCATGGAAAGTGGTGTTGAGCCATTAACTTTAATGCCACA ACTTGCTACAGTGATTACTGATATACTTGCTGGGACCTATGATCTCACAAAAGAAAGGCGAAGAAGGAAGTTCTTCAAGAGACAGCCATTGTCCAAAGAA GACATGGAAAAGCTTCGCCAGGCTCTGAAAACTTTATCTGAGGCTGAAAAGCAGTTGAGGATGTCGAATGACAAGCTAACATGGTTGACGGCTGCATTGC TTCAACTTGCTCCTGACCAGCAATATCTGTTGCCTACTTCATCTGATAATAGTTTCAACCATAGTCCCTTGGCTATAAACAATGCTCATGTGAAAGAAGC AGCGAGAATAACTGGTAATCCTGTTGAAGCAAGACGATTATCAATGGATGATAGAATAGAAAATTTCCATGCCGAAAGCTCAGGTAATGGTGTGACAAAG GGTGTCAGTTCAGAGAAAAGAAGACATAGTGTGTCTGGTGTTGCTGCTCAACATACTTATTCGCGTACCACCAATAATACTAGGATGAATGAAAGGCATA TTTTAGGTAAAAACCATAAAGAAATTGAAGAGATATGGTTCGAGGTGCTTGACAAGATTGAAATTACTGGTCTGAAAGAGTTTCTGTACACAGAAGGCAA GCTGATCTCTGTTAGTTTTGGGGCAGCTCCAACTGTGCATCTAATGTTTAGTTCTCAACTGACCAAATCTACTGCCGAGAAGTTCACAGGTCACATCTTA CAAGCATTTGAATCGGTTCTTAGATCTTCCATAACGATAGAAATTAGATGTGAGACAAACAAAGATGTGTGCGCGGTTCAGCAGTCTCCTATATTGTCTG GTATTAACAATAGCTCGCCTCAGATTAGAGACTCAAAAGATGTTGCCATTCAAGGTCATCCTTCAGTGACTGGTTCTGTTGAAAAGGGAACGGGTGAAAT TGTAGAAGAAGCAGCTTCTCCAGTGCAGTACAAAAATAATACCCAGCAGGGTAGTGCTCACGCGGGATCTTATAGAAGTCCAGGACAAACATCGGGTTCC CAAAAAGAGTCAATTGTTAAGTCGCATTTAGACCGAAGGAAGCTTAAGGAACAAAGCCAAAGTCGAAGTCTTGTAAGAAGTAAGGTATCTCTTGCTCATG TAATCCAGCAGGCCGAAGGTCAGCGAAATGGGTGGTCGAAACGCAAAGCAGTTTCTATTGCTGAAAAGCTTGAACAAGAGAATCTGAGACTGGAGCCAAG ATCAAGGAGCTTACTATGCGGGAAAGCATCAAGAGCAACTCGTCGGAAGCTGTCACGCTTGAAAACTCGAACTCAAAAACCATGTGCATTGTTGAAGCTT GTCTCATGTGGAAAATGTCTATCTACAAAATCTCCAAGGTAGTAGCAGTTTTGAGAATCTTCCAAGGGTTCATTCAAAAGCCACTTCTATTCACTGTATT TCGGCTTTTCCTGCTGTGTTATAGGTTCCAATTTTACAGGTCAAGCCTTTTTCAACATTTAATGAAAATAAAAGCATGTAGTTATATTTCGGATGAAGAA AATGTAGGAAGTTAGTTTATGTAGGAGATTCCATTTTAGTGGTAAGATATTGTTATATGTTCCTTTGTAGCATATATATTTCCTGGAAATTTCAAACAGG TTCAGTTGAATACTTCATTAGTTACTATTGATATGTGCCCAGTGTCTTTCCTTGTTGCACTCTATTGCAAAGTCACTGGCCTTCATTCTATTAATACAAT AATATGGATTACATTCCTGTTAAGTGCAGGGTGCACTTGAAGGGCATTGGTCGGTGATGCAACTTATTAGATTATTATCGAATATCCGTCGATTTTTTCG CTATCCGTCATCTAATATCCGGAATCTTGAGCATCTATTTACTTGGACATTATTTTGATGCAGCATCCGATGAATGATTTGCTCCAAGAAATAATTCTTG GTTGCTTGTCAATTTGAATGCCAAAATTTGACATTGTTTATAAGATTTTAACTTGTACCTTTACATCCTGACATACCTGGGGAGCAAGTTAGGATGTTGA TAAGCACTTTGGTGCAAATGTCACTGGTTATGAAATTTCTGTGTCTGACAATTTCCATAGTGCAACTCGAATTTGCTAGAGTTATTAAAATCGTACTCAA GGG BLAST
Tissuepods
Gene nameLI_gene_185661; 
Additional informationdetails; 

Expression of Ll_transcript_298821

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_298821
BlastpProtein STICHEL-like 3 from Arabidopsis with 53.39% of identity
BlastxProtein STICHEL-like 4 from Arabidopsis with 50.97% of identity
Eggnogdna polymerase iii subunits gamma and tau(COG2812)
KeggLink to kegg annotations (AT4G18820)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019431591.1)
PfamDNA polymerase III, delta subunit (PF13177.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;