Ll_transcript_300575

• Id Trinity: TRINITY_DN51535_c0_g2_i1
• Name Transcript: Ll_transcript_300575
• Sequence: TTATTCACTTTTGTACGAGACTTCTTTATTCACACTTGAAATACCCAACATTCTCAATTATAGAAAAGAACTATATCCATTGACATTAACTCATATTATT GTATAAGTAAATGTATCTAATGTACAAAATGGCAAAATACAAAAAAAAACTTCATTTTCACTTATAAAATCGAACGACAAAGTATTTCTCTTTTCAGATG AGCATAAAATTAGGAGACACTGAACTAGGAGTATAGTATACACACTATTTGTTATTAGTCATACACTATCATGTTAAGGAGTCACTATATTATCTTACCT ATAATATGTTGGGCTAAAAGATTAGGTTTACCACTTTAGACTATGTAAAAGGTTTATTAAGTGAAATAGGTAAATTTATTTAATTATATTAGACTATTTA ATCAAAACTTGAATATAAAAAAACGTAATTTAAATATGTTGGTTTATTTAAAGTGTTCACTTTTAGGACCTGACCCGTTTTCACTGAAGTTGTTGTCTAT GAAGTGGTCACTCAAATCCTCTGACGGCGATTCAGTTGAAGTGTTAAAGAAAAGACGAAACATATGATCCAACATAGAAGTCGTGTTCAGAAATTTGTTA GATTTCTTTCCTGGATCCTGTGGTGAAGGTTAAAAGTCACTTATAATTTCCAAAGCCTGGTCTAATGCTGCTTGAAGCTTCAAACCCTTAAAGTTCTGTG TAAAGAGCTCATAGAAATGTTTGCTGTTCGAAATCTCGCCCCTTCAAAGTTTAAGCCACTCCGTTATTTATCACTTCTTTCTGAGTGCAGAAACCATGCC CAATCGAATCTCTTGCCAATCTCAATACCATACTCAAAACCCCATCTCCAAAGCTTTGCAAAATTCTCACTACAACCCTCAATTAATTTGTTTAGGACTT TCTCTTCACAGCCTGGAGGTTCACCTCTGAAACAAAACTTGCCCCTTTCCCGTGAAGGTAATTATGATGAAGGCACTTCATTGTCTCTTTCCGTCTGCCC TGGTTGTGGGGTTTATATGCAGGACTCCAGCCCTAAGCATCCTGGTTATTTTATCAAACCATCTGAAAAGGACCCAAATTATAGACTGCATGCTCATCTT GAACATGGAGCACAAGAGCCAGAGTTCTCCAATTCTGTTAAAACGGGACTTGTTGTTGAACCAGAAAAGCTCAACGCTGGTGATTTGAACTTGACCAGGA AACCAGAGAAGCCAGTGGTATGTGCACGTTGCCATTCATTGAGGCACTATGGGAAGGTGAAGGATCCAACAGTGGAAAACTTGCTACCGGATTTTGACTT TGATCATACGATAGGAAGGAAGTTGGCATCAACAAGCGGGACACGCTCAGTGGTGCTTCTGGTTGTGGATGCAGCAGATTTTGATGGGTCTTTTCCAAGG AAGGTTGCAAATTTGGTATCTAAGACAATTGAGGATAATTCTGCTGCGTGGAAGCAGGGCAAGTCAGGGAATGTGCCTAGAGTGGTACTTGTGGTGACAA AGATTGACTTAATTCCTAGCTCATTGTCTCCAACAACATTTGAGCATTGGATTAGGCAAAGAGCAAGAGAGGATGGAATTAATAAGATTACTCGTTTGCA CATGGTGAGTTCGCTGAGGGATTGGGGACTGAAGAATCTCGTTGATGATATAGTTGAATTGGCTGGGTCTCGAGGGAATGTGTGGGCAGTTGGGGCACAA AATGCAGGAAAGAGTACATTAATAAATTCTTTAGGAAAGTATGTTGGAGGGAAGATTTCACATCTGACAGAAGCACCTGTGCCAGGGACCACGCTAGGCA TTGTTAGAGTAGAGGGTGTTCTTCCAAGTCAGGCAAAACTATTTGATACACCTGGCCTTCTTCATCCTTACCAGATCACAACTAGGTTGACGAGAGAAGA GCAAAAGCTTGTTCACATAAGCAAGGAGTTGAAACCTCGGACATACAGAATTAAGGCTGGTCAATCTATTCACATTGCTGGTCTAATGAGATTGGATATA GAAGAAATGTCCTCGGATACTATTTATGTCACAGTGTGGGCATCTCCTTATCTTCCACTGCATATGGGTAAAGTAGAAAATGCTTCTAAAATGTTTGAAG ATCATTTTGGCCGCCAGTTGCAGCCACCAATCGGGGAGAAACGAGTTCAAGAACTTGGGAAATGGGCGAGAAAGGAATTCCATGTTAGTGGAAACAGTTG GGAGTCAAGTTCTGTAGACGTTGCTGCTGCTGGCCTTGGGTGGTTTGCTATTGGACTTAAAGGAGATGCAAAGTTAGGTGTTTGGACTTATGAAGGAGTT GATGTTGTTATTCGTAATTCTTTGATACCCTATAGATCAAATACTTTTGAAGTTGCTGGGTTTACAGTATCCAAGATTGTCTCTCAGTCTGACCAATCCT TGAATAAGTCACATCAACGAAATGACAAAAAGGCAAAGGCATCAAAAGCGCCATCAAGTTTTGTTGAATTAGCACCATTAACTTCTGATGGAGGCATCTC CTAATGGTGTCAGTTTTGAAGGAAGTGAGTGGAATTGAATTGCCATTTAGTTTCTGAATGGATAATTTCCAAAAGATCAAAATTTCAAGTGGCAAATGCA AGCAAGGAGGGTTGCGTAATGGGTGGAGGATCAAGTGAGGCATAAGATAATTTTGCAGTAATCTTTTTATCCAAAGTCCAACCTAAAGTTGTAGCATCTG GATATATCGTTTTCCTTGTAGTTTCCTTAATTCAATTGATGAGTTTTATTACATTTTGTGGGTACTGTTATGCTGCTTCTTAACTTTATTATTGCAGACT AGAAATGTCCCTTATTGTTAGGGTCCTTGCTAGTTACTTGAGTCTTGAACTAACTCAATGAAATGAGTCTAAATCAAATGGGTCTTTAACTGACAATTTA AG
• Tissue: pods
• Gene name: LI_gene_185666;
• Additional information: details;

Expression of Ll_transcript_300575

FPKM

• PAB: 0.6
• PNAB: 6.5
• PS1: 4.7
• PS2: 4.7
• PS3: 5.3
• PW1: 3.6
• PW2: 3.8
• PW3: 3.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_300575

• Blastp: GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic from Arabidopsis with 52.81% of identity
• Blastx: GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic from Arabidopsis with 52.81% of identity
• Eggnog: Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity (By similarity)(COG1161)
• Kegg: Link to kegg annotations (AT3G57180)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413995.1)
• Pfam: 50S ribosome-binding GTPase (PF01926.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;