Ll_transcript_300594

• Id Trinity: TRINITY_DN51535_c0_g6_i1
• Name Transcript: Ll_transcript_300594
• Sequence: CTTCACTGATATTTGATAACTTCGCTACTTCGTTCCTTTTCTTTCTCTTTATTTTATGGTTTTATAAATCAATTAAATACAATGATTCTTTAAAAAAATT ACTAACACGCACCAACTTCTTAATCTACCAACAACAAGGTAAGCGTATTAGATTCTAAATTATTTTCTTACCCATATTACTTAGATCCACTTGCTTATGA AAAGAAAAAAGAGATTCTAAATCCAAATGTTTTATTTTGAGCCGGTACTGGCTTTTCTGGTCTAGTTGCGTGATAAGAATCAAAGTCCTCGAAGTTCCAA TCATCATTGAGTACAATGTGGAAGCTTCATCGGAAATCGATCCTCATACCGTTAACACCCAACCACTCTTCAAATATCACAACAAATGCCCTTCGACGCC GCAAAACTCACCACGACTCACTTCACAACTTCAACCACGTTTCCATAAAACTGGACCCATCAAAGAACCCTCACCTTCGCATACATGCTTTCTGCGAAAT GGGTCTCGTTGGAAAAGCCTTGCTGCTGTATAAAAACATGAGCACATTGCCTCTGTTGCGTACTTGCAACACGCTTCTTCATGGTTTGGTTAAGGCACGG TGGTTTGGTTCCGCCTGGGATGTGTATCAGGACATGGTGTGTCGTGGGTTTTTGCCTACTGTGATCACCTACGGCATTCTAATGCAATGTTGTTGTGTTC AAGGTGATTTTGTGAATGCGCGTAAGGTGTTTGATGAAATGATTGAGAGGAGGATTGAACCGACGGTTGTTGTTTACACTGTTCTTATTCGTGTATTTTG CAATGAGGGTCGAATGGCGGAGGCCGAAGGGGTTTTTAGGATGATGAGGAAATCTGGAGTGAATCCCAATTTGTACACTTATAATACTCTTATTGATGGG TACTGCAAGGTGGCTGATGTTGAACGAGTTTTTGCATTGTATCGAGATATGCTATGGAAGGGTTTGCAGCCTAACATTGTGACATTCGCTACTCTCGTAG ATGTTCTGTGCAAGTTGGGGTGTTTGAAGGCTGCAAGGAACTGTTTTGCTTACATGCCAAAATTTGGAGTTGTTCCTAATACATATGCTTATAATTCTTT GATAGATGGGTACTGTAAGGTGGGGAACTTGGATGAAGCAATGAATTTGAGAGTAGAAATGGAAAGGTGTGGAACCTTCCCAGATGTGTTCACTTTCAAT ATACTCATTAAGGGTCTAAGCGACTCGGGTAGATTGGAAGAAGCTGAGGATTTAATGCAGAAAATGGACACAGCTGGGGTACTTTCAAATTGCGTGACAT ACAATATAATAATTGATGGATACTCTAAAAAGGGCCATATGAAGAAGGCTATGGAGGTGTGTTCGCAAATGACTGGAACGAAAATAGAACCAAATGTCAT CACATTTTCTACCTTAATTGATGGGTTCTGTAAATTAGGAGATGTAAAGGCTGCAATGGGCTTGCATACGGAAATGGTAATCAAAGGTCTTGTGCCTGAT GTTGTAACTTACACATCTTTGATTGATAGGCACTGCAAGGAGGGGAACATGAAAGAGGCTTTCAGGCTGCACAAGGAGATGCTGAGTGCAGGACTCAAAC CCAATGTGTTTACAGTTAGTTGCTTAATTGATGGCCTTTTCAAAGATGGAAGAACATACGATGCAATCAAACTATTCTTGGAGAAAACTGGTTCTGGTTG CCCTGGAGATAAGATCGGTAGCAGCTTCTGTTCTGTAAACAATGTAATTTACACCATTTTGATTCAAGGTTTATGTAAAGATGGACAGATCTTTAAGGCG TCTAAGTTTTTCACAGATATGAGATGTAATGGGATTAAACCAGACATGCTAGTTTATGTTACCATGTTGCAGTCACATTTCCTATCCAAGCATATGCTTG ATGTAATGATGTTGCATGCAGACATATTGAAGATGGGTGTTATGCGAAATACTTCCGTATGTCGTGTATTGTCTAGGGGATACCGAGAAAATGGATATTT TAGATCAGCCAATTTTTTGTTCTAAATATAAATGATTTCCTGGTAAATGGTCATCAGTTACTTGAACAAGTGATCACACTTGGTTATTTCTCTTGCTTGG ATCATGCTTATTTGTGCTTGAGCATTTGAAGAGCATAAAATAAGTCATTTTTATCGGCATTACTTCATGACCACCGAGCACAGCAGGCAATGAAAGGACT TGCTTTATGGCGGATGTTGCATAAGAAATAAAGGCAGATTGGAATTGGATTGCTGAGATTATACTCATCATCTGAGTAGTGAGAACAGAGACACACCTTA GTTGTTTCCTTTTGAATTAAACAGCTATATTTTTCGGTGAAGAATTTGTTATTTAAAGTTATGTTTGGCAAGGCTGAAAAGTTCAGATATTAAAGGCTTA AGGCTGATGAACTAACTTGTTGAACTCAAGTGTTTGGTAAAACTCAATCCACTGGAAAATGTAAAATGATG
• Tissue: pods
• Gene name: LI_gene_185670;
• Additional information: details;

Expression of Ll_transcript_300594

FPKM

• PAB: 0
• PNAB: 1.1
• PS1: 1.1
• PS2: 0.7
• PS3: 0.9
• PW1: 1.1
• PW2: 0.8
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_300594

• Blastp: Pentatricopeptide repeat-containing protein At5g61400 from Arabidopsis with 47.57% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g61400 from Arabidopsis with 47.57% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G61400)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416111.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;