Ll_transcript_300911

• Id Trinity: TRINITY_DN51537_c1_g1_i6
• Name Transcript: Ll_transcript_300911
• Sequence: CCTTTTCTGAAAAGTCAATAATAATTAAAAATCAATGGTGATGATGTGATGGCAGTGTATAAAACTCATACAATGTCAGTGCATACATCTTTATCTCTAT TCATAAATCATAACCATGTTAGTCATTTGTGGTTATACTATCTTTTGTGCAGAATTTCTGGCAATCCAATCGTGATACCAATTTCTCAATCTAGGCCAAG TCACAAAGTTTAGGTTAGGAGAATCTTCCAAATTATGAATTATGTGATGGTTTTAAGTATGAATTAGTTTAAGTTTATTTGAGAGATGACAATGGGAGTT CTCATGTAATCACCAATGATCAAATTTGTAGTAAGATTGAGAAAGACGTGGTGGACTTGGATAGAGGTGAAAACATAAATGCCGCGGAAAAGCTTATTAT GAGAATTATGCCTATAGAAGTGAGTTTTCGATCTGGAAAGGCCGATATAGTTATAAAGATTGGAGAATGAATCTGCCAGATTTCTCGTCAGTCGTCACCA TTTCCAGATAAAAAAAATTTATTGGCCCATCTAAGGAACAATGAAAAAAAAAAAAGAATCTTTGAGATGTATATGAGATTGAAATTAGGGAAACTCGTTG ACATTTTCCCTGAAGAATGACAAGTTATTAGGTTTATATCCCATCAGAATCATGAGTTATTGCCTCTGGAAGATGTATATTTTATTGCATTAACTGCAAC TTTCCTAAGGAAGATTAAGAGGGAAGTCTGTTATTAAAAGAAACTGGTCTTTTATTGAAGCAGATAAAATTGGTTATGCTTAAGGAAAATGTAAAGCTTG AGGGTCCTCCTTTTGTTCACAAAGACACTCATAGCCTCTTCAATAATATTTACCAAGATTATATGGATGATTATGCTAAATGCTAATTATCTTCTTGAGT TTGTAAGGAGGACAAGGATGACTGCTAGTATCATCATCCATGTTCTCTTGGTGACTCTTATTGCAGAAGTTAATAATGTCTGTGAAAAAATGAAAGATCC ATATGCTTTATAAATTTTTCAAGCTGCATAAGACATTATTTGTTTTGCTGAAAGGTCACCTTCTTTTGATTACAAAATTTAATCCTCATCTTCGAAGTGT TTGCGGTTAGATGTGAGAAAAGCAGAAAACTCTTCGTAGGCATGATTTCTGTGAGATATAAAGTGAATAACTCACCATTCTTATGGGAAGATGTCAAGGA ATATCTTCAATTTCAATCTCATATTACATCCACATCTTAAATATTCCATATTTGCTTGCTCCTTCTGTCAACAACTTTTTATCAGGAAATCTTTCATGGT AATGACACATCCTGCCTATTCATTCTTTAATTTTAATTAATAAATTGACCTTTTCATAATGAAACCCCACTCCTTTGGGGATAAAACTTGTAAGATCAAT AAAACTGGTGATTCTCAACCTACATTGACACATAGGTATCATTACAGGACTTCCAGAATGAAGAAAAAATGCTATAACCACATGTATTTTACATGATTTA TAATTATTGAAGCTAACCCCACTCCAAAAAAAAATAAGTGATGACAAACGTTTAAAAGTGAAGGCTTGATGTTAGATGAGAAGCATCCAAAGAAAAATTA AAAGAGGAGAGCTGATATTGCATCCTACCTGCTACTTTTGCTTGATGATGATTGGCATTGCAGGTTTAGACTTTGTTCAAGCTACGAACCTTAGGAGAAC CACAGAAAAGCTAGCTGTTGAGATTGGAAAGCCCAAGGCCAAGTAAACCCTACACCAAAATTATGTGCTTGTGCCTTGTAATGTGGGACTCAAATATCAT GCCTTGCAATTGGATCCTAACATCCCATCATGCTCCGCAGCCTCCGCGCCTAAGCAGGCAGACAGTGCACTATCCCTTTGAATAATCCGGGGCAAACACT GCAATGAGATGTGTTCTCAGGAACTTGGTCAGAAGGAGTACACTATTCTGGGGTTCTGGAAGAATGGTTTGGTCAACATTGGTGGTCAACACGTCCTGTC TTACTGCTGTTCACAATGCTTCTAGTATTCCTGCCTCTTGCATCATTTAGGCGTGTTGATTCACTGAGATATACATCAGCATTGTCCGTGGGGTTGGCTG TTATTTTTGTGGTGATAACAGCAGGAGTAGCAACTTTTAAGTTTATTGATGGAAGCATTGGGATGCCACGCTTAATGCCAAAATTCACTGGCCAGGAATC CTTTTGGAAGCTCTTCACAACTATCCCCATATTAGTCACAGCTTACATCTGTCATCATAACGTTCATCCTATAGATAATGAACTTAAAGATCCTACCCAT ATGAAGTCAATAGTCCGGACATCACTCTTGTTATGCGCATCTGTGTATGTAGCAACCAGCCTTTTTGGATTTTTCTTATTTGGGGACAAAACACTGGATG ATGTTCTTGCCAACTTCGATGGTGATCTTGGAATTCCTTATGGTTCATTTCTTAATGATGTAGTTAGAGTGAGCTACGGTGCCCACCTTATCCTTGTGTT CCCAATTGTGTTTTACTCCCTTCGCCTTAACGTAGATGGTCTTCTGTTTCCGCACGCCATTCCTCTTGCCTTTGACAACCAGAGATTCTATTTGGTGACC ACAGTTCTCTTGATTTTCATTTTTCTTGGAGCCAATTTTGTTCCCAGCATCTGGGATGCCTTCCAGTTTACAGGTGCCACAGCTTCTGTCTCTGCTGCAT TCATTTTTCCTGCTGCCATTGCTATTAGGGATACACGTGGGTTTGCAACAAAGAAAGACAAACGGTTATCTTGGTTGATGATACTTTTAGCCATCTCATC TAGCACTGTAGCCATCTCTAGTGACTTGTATAGCATCTTCAGTAGTGAAGCAGGAGCAGCAGCTAGAACCTGATATTATCAAGATTACTCTGATAGATGA TACTGAAATCAAAATATCCTTGACTGGATTGTGTGACAATATATAAAGCAAGAAGGCAGAGATGCCAAAAATGAGAAAACAATGCTTCAATACCGAATTT GATTATTTGGTTGCTGTGGAATTTCACTGTAATCTTACTGACAGATTAAGGATGATAAACAGTCGCTGCCAGTCACTCACAACTAGCTGGGTCATCATGG TATGCACTGGCCGAGGATCTAAGGAGCAGCTCCTTCCCTCAGATTTTTCAAACAATTCTTACTAATATATAGGTATATTAACAACATCCTTTGTTTAAAT TGAAATCCTTTGACTTATGTGAAAATTGAAAACCCAAGAGTTCCTGCTTCTTCCTTGGTGAAAAAACTCAAGCCACTTCCTTATCAAGTCAAGAATCACT TTCCTAGGTTCCCTCTTACTTCTTCCTTTTACCCTTCTCCTTTTCCATTTTTTTAATTTGATACTCTTTTATTTTAATTTGGTACTCTTCTCTTGTTCTC ATGATCTTTGCTATTCTTCTTTTTCATTGTACATAATGAATCTTATTAGTTTTTTATATAAATATTTTCTGATCAATTATTT
• Tissue: pods
• Gene name: LI_gene_185688;
• Additional information: details;

Expression of Ll_transcript_300911

FPKM

• PAB: 0.2
• PNAB: 1.3
• PS1: 0.4
• PS2: 0.8
• PS3: 0.8
• PW1: 1.2
• PW2: 1.3
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_300911

• Blastp: Amino acid transporter AVT6A from Arabidopsis with 61.15% of identity
• Blastx: Amino acid transporter AVT6A from Arabidopsis with 60% of identity
• Eggnog: amino acid transport(COG0814)
• Kegg: Link to kegg annotations (AT3G30390)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458311.1)
• Pfam: Transmembrane amino acid transporter protein (PF01490.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;