Ll_transcript_300638

• Id Trinity: TRINITY_DN51541_c1_g1_i5
• Name Transcript: Ll_transcript_300638
• Sequence: CAGCTTCAGTTGGAACTTTACCACCTAGGGTTTTTGTGGGGCACTCAATTTACAAAGGGAAGGCTGCACTCACTGTCTCTCCTAAATCTCCGGAATTTCA ATCATTGGAATCCGGGGCATTCAAAGTATCTAAGGAAGGTTCTGTGCTACTTCAGTTTGCTCCTGCAGTTGGTTTGCGTCAATATGATTGGAACAGAAAA CAGGTCGCTTATGCTTTTTCTATAACTTGATTGCTCCGTATTGAGATACCAGGATATATCTAGATTCTATAATAATGTTATATGGAAAAACCTGAGTTTG GTGTCTTGACTATTCTATAATAATGTTATAAATTTGATTTCTTATAAAGTCTAAGTGCATTGCATCATGTCCACTGCAAAAAAAGTGCATTATAGACCTA GTTTTGTGGCCTTGTCTTCATATGGTTTTGTGAAATATTATCGCCTCCTCAATGGAAAATGGAAAATGGAAAATGAAAACATGATATCGTTGAAATTTAC GATTTCGTTGATCAGATCTTAGTCTTATAGTTTAAAACATGAGTTGATTATCCAGTTTTCTTGAATCAGGTGTTCTCGCTATCAGTGAGTGAATTGGGAA CTCTAATTAGCCTTGGTGCAAGGGAGTCTTTTGAATTTTTTCATGATCCAAATCAGGGAAGAAGTGATGAAGGTAAAATTAGAAAAGTTTTGAAGGTGGA GCCACTCATGGATGGTTCTGGTCACTTATTTAACCTCAATGTTCAGAACAAGCTTGACAACATCGACGAAAATATCTTCATTCCTATTACAAAGGCAGAG TTGGCGGTTCTCAGCTCACTTTTCAATTTTATCATGCCATACCTTCTAGGTTGGCATACTTTTGGAAACTCTATAAAGCCAGATAATTCCAGCAAAGTGA ATAGTGACAATCCAAGATATGGAGGAGACTATGAATGGAACAGATAGGGATCACTTCTACCACCCCTCTTGAAGCTTCTCAACTTTCAAATATGTGAAGT TATTGTATTCTGTTAGTGTTAGCTGATAGCTGTTTGAGAAATTTTGAGATAGCAGTATAATGTAGAACAGTTATTTTTAACTATTTACTCATTTCTTTTC ATGAACTTTTTTACTCTTTTTATTTTTATTTTTAGACCATGTCCAATTCCAGGAAACAACCTTTAAGGCTACGTATATTTATCATCCCCATACCTGGATA CTCACTGAGTGAGAGTCTCGTGCG
• Tissue: pods
• Gene name: LI_gene_185738;
• Additional information: -

Expression of Ll_transcript_300638

FPKM

• PAB: 0.3
• PNAB: 0.2
• PS1: 0.3
• PS2: 0
• PS3: 0.1
• PW1: 0.2
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_300638

• Blastp: -
• Blastx: Single-stranded DNA-binding protein WHY1, chloroplastic from Arabidopsis with 73.23% of identity
• Eggnog: Single-stranded DNA-binding protein that functions in both chloroplasts and nucleus. In chloroplasts, maintains plastid genome stability by preventing break-induced and short homology- dependent illegitimate recombinations. In(ENOG41124UZ)
• Kegg: Link to kegg annotations (AT1G14410)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454669.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;