Id Trinity | TRINITY_DN51541_c1_g1_i6 |
---|---|
Name Transcript | Ll_transcript_300640 |
Sequence | GCTCGTAATCATAATTGACATATTCCATTAATATTTTTAAGTAATAACTTTTGCTCGCTAATGATGTTCCCAAAAGTCACGGTAACAAGTTGATCCTTAT AATAAGGTGAGAAGTGAGAAGTGAGAAGTGAGAAACAATCGCATCATCATTCATTGATTAAGAGTATAGGATTGAATAACATAAGAGATAAGAATCATTG AATCAAAGAAAGAAGGAAAGAGAAAATGGGTAGCAGAGTAAAGGGACGCACCGTTTTGGATGTTGGAGCTGATGGGGTTGCCATCATTACCATCATCAAC CCTCCTGTCAATTCTCTCTCCTTTGATGTATTGCACAGTTTGAAGGAGAGTTTTGATCAGGCTTCACAGAGAGATGATGTGAAGGCCATTGTTGTAACAG GTGCAAAGGGAAAGTTTTCTGGTGGTTTTGATATTAGTGCATTTGGTGGACATCAAGAGACAAAAGAACTTCAGAAACCTGGTTTTTTATCAGTAGAAAT CATCACTGATACTATAGAAGCATCAAGGAAACCCACGGTTGCCGCTATTGATGGACTTGCATTGGGTGGGGGTTTAGAGCTTGCAATGGCATGCAGTGCA AGATTATCAACTTCTAATGCCCAACTAGGTTTGCCTGAACTTCAGCTTGGAATAATTCCTGGATTTGGAGGAACACAACGACTTCCTCGCCTTGTTGGTC TGTCGAAGGCCCTTGAAATGATGCTGAATTCAAAGCCAGTTAAAGGGAGGGAAGCTTTTAGTTTGGGGCTTGTAGATGGTGTGGTGTCGCCTGATGAGTT GCTGAACACTGCGCGACAGTGGACTTTGGATATCTTGAACCATCGACGACCATGGGTTGTTAGTCTTTACAGGAATGATAAAATAGAACCCCTTGGGGAA GCAAGAGAGATATTGAAATTCGCACGATCTCGGGCTCAAAAAGAGGCTCCTAATCTCAAGCATCCTTTAGTTTGCATCGATGTTATTGAAGAGGGAATAG TTTCTGGACCCCGTGCTGGACTTTGGAAGGAAGCTGAAGCATCTGAAGAACTGTCACATTCAGATACTTCCAAAAGCTTAATTCACATATTTTTTGCTAA GAGAGGAACATCAAAGGTTTGTTCAAGTTTTGTGCCTCAATTTATCCCTATTTCTCCCTTTTCTATTTAGGAGATATATCTGCTAGGCTATATATACTAG TTTATTAAGTGAAAAAGAAAGTGTCTGTATTCTAGCTTAAAAACATGCTTTTAAACTTTCAGGCTTGAATATGATTTGTATGCTTTATTTAATTTAATGG AACTTTCGAACAGAAATATTCTTCTACTTTTTTACCACGTGTGTCTTGTTTCTGTTATTTGGTATTCAACATTGAAATTTGTGAATCCTGACCCATCTTG AATCTGTGCCTACAATGCACATCTTAAATTTGATCTGTAATTTTTTTGGCTTGAGGTTTCATATTTTCTCTTAGTACATTACCCTACAGGTAATATGCTT ATAGGTACTGTTGTGAACCTGGATTGGCTCCTAGCCTGACTCTCAGCACTAACTTATTCCAAATGATTTTCTATATATATGAACTTTCCAATACCTCTTG CATGAAAAGGTACCTGGGGTTACTGATATTGGTCTAGTTCCAAGACATGTGAAAAAGGTTGCCATCATTGGTGGAGGACTAATGGGCTCTGGAATAGCAA CTGCTCTAATTCTCAGTAACTACTCTGTCATCTTGAAAGAAGTAAACGAGCAGTTATTGGATGCTGGTGTTAAAAGGATTAAATCAAATCTGCAGAACCG TGTCAACGAAGGGGAAATAGCCGAGGAAAATTTTGAAAAGGCTGTCTCTCTTCTCAAAGGTTCCCTTGACTATGAAAGTTTGAAGGATGTGGACATGGTG ATAGAGGCGGCCATCGAAGATGTTTCCTTGAAGCAACAGATCTTTGCTGATCTTGAACTCTTTTGACCACCTCATTGCATATTTGCAAGCAACACTACCA CAATTGACTTGAACCAGATTGGAGAAAGGACCAAGTCTCATGATCGAATTGTTGGAGCCCATTTCTTCAGCCTTGCACATGTTACACCACTTCTGGAAAT TGTACGTACTAAGCAGACCTCTCCGCAAGTAATAGTTGACTTGCTAGATATTTCGAAGAAGATAAAGAAAACCCCGGTGGTGATTGGAAACTGTACTGGA TTCGCTGTTAATAGGATGTTCTTTCCATATACACAAGCAGGGCTTTTGCTTGTCGAACGTGGTGCTGATGTTTATCAAATCGATGAGGCAATAACCAAAT TTGGAATGCCTATGGGGCCTTTCAGATTGGCCGACCTCGTTGGTTTTGGCGTGGCAGTTGCAACTGGAACACAATTTATTCGAAATTTTCCTGAGCGAAC ATATAAATCAATGCTTATTCCACTTTTGCAAGAGGATAAGAGGACAGGTGAAGCAACTCACAAAGGGTTTTATTTGTATGATGATAAACGCAAAGCCAGT GTTGATCCTGAATTGAAGAACTTTATTGAGAAAGCTAGGAGTATTTCCGGTGTATCTATTGATCCTAAGCTTGTCAAGTTACAAGAGACGGACATCATCG AGATGATCCTCTTTCCGGTGGTGAATGAGGCTTGTCGCATCCTTGATGAAGGTATTGCAGTCAAAGCAGATGATCTTGATATTTCAGCTGTCATGGGCAT GGGTTTTCCACCTTAAAGGGGAGGTATCATATTCTGGGCTGACTCTCTTGGATCCAAATACATATACTCAAGATTGAAGAAATGGTCAGAATTGTATGGA GAATTCTTCAAGCCTTGTTCCTACTTGGCTGCAAGAGCAGCTAAAGGGATTCCTCTGAGTTCATTGGGGGAGCAAACAAAGTCACGATTATGAGATACAA ACATGTCATTGCATATTTGCTTGATTTTTCCCTGTCATTTCTCCTTTAACATATATGAATGTGGTTGAGCCAGAACCAAATAATGTACAATGATGTGAGA AATTTGAGAACAGCTGAATTGTTTAGTCAAAATAAAGGTAATTCTGGTTTGGGTATATGGGTTTATTGATTGATGATTGTTTCTAACTACATCTTTTGTT TTTTATTGCATTTGTTGCTGCAAGC BLAST |
Tissue | pods |
Gene name | LI_gene_185738; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_300640
Blastp | Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a from Cucumis with 72.67% of identity |
---|---|
Blastx | Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2 from Arabidopsis with 76.87% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (101210295) |
CantataDB | Link to cantataDB annotations (CNT0000094) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_004508202.1) |
Pfam | Enoyl-CoA hydratase/isomerase (PF00378.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |