| Id Trinity | TRINITY_DN51541_c1_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_300643 |
| Sequence | GTAAAACTCTTGCCCAAAAGGTAAAACTATTGGTTGCTATTGATTGCTAATGATGTTTCAAACGGAAAAGGTAAAATTGTACCGACTGAGAGTGACGGCA CAAGTTGTTCCATATAAGAAGCAGGGAATTGAGAGAATTGAGAAACAAACACATTGTTCATTTGTTGATTGTGAGGAATTGGGAGGAAGAGATAAGAATC ATTGAATCAAAGGAAGGAAAGAGAAAATGGGTAGCAGAGTAAAGGGTCACACTGTTATTGAGGTTGGAGCTGATGGGGTTGCCATCATCACAATCATCCA CCCTCCTGTTAATTCCCTCTCCCTTGACGTATTTCGCAGTTTAAAGCAGAGTTTTGATGAAGCTTCACGGAGGGATGATGTTAAGGCAATTGTTGTTACA GGTGCTAAGGGAAAATTCTCTGGTGGTTTTGACATTACTTCCTTTGATGGACTTCAAGAGGAAAAAGAGTATACAAGTCCAGGTGCGATATCATTCGATA TCATTTCTGACACTGTAGAAGCCTCAAGGAAGCCTTCAGTTGCTGCCATTGATGGCCTTGCCTTGGGTGGGGGGTTAGAGGTTGCATTGGTATGTGTAGT CAAGTGTTTAGGATATGAAACTGTTTTGAGTTTTTTGTACAAAATATTACCTGTTCTTCCTCTTACAGGCATGCACTGCACGATTATCAACCTCGACTGC GCAACTAGGTTTGCCTGAACTTCAACTTGGAATAATTCCTGGATTTGGAGGAACACAGCGACTTCCTCGTCTTGTTGGCCTGGCAAAGGCCCTTGAGATG ATGCTGACCTCAAAGCCAGTTAAAGGGGAGGAAGCCTGTAATTTGGGGCTTGTAGACGCTATAGTGTCATCTGATCAGTTGGTGAACACTGCACGTCAGT GGGCTCTGGATATCTTGGACCGCCGACGACCATGGGTTCCTAGTCTTTACAAGAATGACAAAATAGAACCCCTTGGAGAAGCAAGAGAGATACTGAAATT TGCCAGAGTTCAGGCTCGAAAACGGGCTCCTAATCTCAATCACCCATTGGTTTGCATTGATGTTATAGAAGAGGGAATAGTTTCTGGTCCCCGTGCAGGA CTCTTGAAGGAGGCTGAAGCCTTCCAAGTACTCGTAAATGCAGATACTTCCAAGAGCTTGGTTCACATATTTTTCGCTCAACGAGGGACATCTAAGGTAC CTGGGGTTACAGATCGTGGTTTGGTTCCAAGACCAGTGAAAAAGGTTGCCATCCTTGGTGGGGGATTAATGGGCTCTGGAATCGCGACTGCTTTAATTCT TGGTAACTATCCCGTCATCTTGAAAGAAGTAAATGAGAAGTTCTTGGATGCAGGTCTTAAGAGGGTTAAAGCAAATTTACAAAGCCGTGTCAAGAAAGGG CAATTGACTCAGGAAAGATTTGAAAAGACCATTTCTCTTCTCAAAGGCACCATTGACTATGAATGTTTCAAAGATGTGGACTTGGTGATAGAGGCTGTTA TTGAGAAAGTTTCCTTAAAGCAAGAGATCTTTGCTGACCTTGAAAAGTATTGTCCACCCCATTGTATACTTGCAAGTAACACTTCCACAATCGACTTAAA CCTCGTCGGAGAGAAAACCAAGTCTCAAGACAGGATTATTGGAGCCCATTTCTTCAGCCCGGCACATATTATGCCACTTCTGGAAATTGTTCGTACTAAG CAGACCTCCCCCCAAATAATAGTTGACTTGCTAGATATTGGAAAGAAGATAAAGAAAACTCCAGTGGTTGTTGGAAACTGTACAGGATTTGCTGTTAATA GGATGTTCTTTCCATATACTCAAGCAGCTATATTGCTTGTTGAACGTGGTACAGATGTTTATCAAATTGATAAGGCGATAACTAAATTTGGAATGCCCAT GGGGCCATTCAGATTAGTTGACCTTGTCGGTTTTGGCGTGGGGGTTGCAACTGCCATGCAATTTATTGAGAATTTTCCAGAGCGAACTTATAAATCAATG CTTCTTCCACTTATGCAAGGAGATGATAGAGCTGGTGAAGCAACTCGCAAAGGGTTTTATTTGTATGATGATAAACGCAAAGCTAGTCCTGATCCTGAAT TGAAGAATTATATTGAGAAGGCCAGGAGCGTTTCTGGTGTCAGTATTGATCCTAAGCTTGTAAAATTACCAGAAAAGGACATCATAGAGATGATCTTCTT TCCGGTGGTGAATGAGGCTTGCCGAGTCCTTGATGAAGGTATTGCAGTTAAAGCAGCTGATCTTGATATTTCAGCTGTCATGGGCATGGGTTTTCCACCT TACAGGGGAGGCATTATATTCTGGGCTGATTCTCTTGGATCTAAATACATATACTCAAGATTGGAGGAATGGTCAAAACTGTATGGAGAATTTTTCAAGC CTTGTGCCTATTTGGCTGCAAGAGCTGCCAAGGGGATCCCTCTGAGTGCTTCTGTGGAGCAAGGGAAATCACGGTTATAAGCTTCCATTGCTCATTACTT GATTTAATTTTCTTCAATGGTTATTTTTCCTTTCAAAAGATAGGGACATGGTTCAACTAGAGCCAAATAATGTATGATGATGAGATCTTTGTTGCTGCAC AATTGTTAAGTTAAATAAAAATAGTTTGGGTTCAGATATTTATAGCTTTTATTCTGTTGCAAGTGAAATGAATAGTTGTGCCTTATACAATAATAAGGAC CAACGGTTATTGGTCCAAGTGATACATGATTGATTACCTTTAAGTAAGGTTTCGGATTCGAGTCTTGTGTATAGAAAAATCTCCGCTGGGAGAGTCAGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_185738; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_300643
| Blastp | Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2 from Arabidopsis with 78.04% of identity |
|---|---|
| Blastx | Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2 from Arabidopsis with 78.44% of identity |
| Eggnog | Enoyl-CoA hydratase(COG1024) |
| Kegg | Link to kegg annotations (AT3G06860) |
| CantataDB | Link to cantataDB annotations (CNT0000094) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419537.1) |
| Pfam | 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain (PF02737.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |