Ll_transcript_300696

• Id Trinity: TRINITY_DN51545_c2_g1_i11
• Name Transcript: Ll_transcript_300696
• Sequence: GGGAACCTGTCCCACCAAGAAGCTATCATGACTAGAAGGTTGATTTGAGGTTTCTTTTTGTCATCTTTGTAATAAACCCTCAATCAATTTCATTCTCTCA AATGTGTCAATACCATAATTAACACAAAATCTCTCAAAGTATTACTTCTATATCATGATAAAGATATCACTTTGAGGTTAAGCCATTCTTCTCTCACACA CTGAACTAGTAAAATCTCGCTTTCATTTCTTCAACAACCGACAAACATCAGAGCCAGACATTTCTTCATTTATTCCACAATATTCATTCAATCTCCTAAC TAGGTCTGCTCATATGGTTTGATCTAATCTCAGGAACAAGTTACCTAAATCTCCTATGTGGTTTTCATTTCATCACATGGAATCTATGTTTCATGACAAC ATTTTTAGATGTTTTCAATGGTTTTGAAAACTTTGATACTTCAGGGTTTAGTGTATAGCTTGGTTACTATATACTGAAATAATGAGTTGGGGTCGTAAAG GCTCTCCCAGAATGTCTTCTTTTTCTTCTCATCGAAGGCCTCTTTCTTGGATTTTAGTTTCAGTTGGAGGGCTAGCAGTTTTCTTAATTTATGCTTCATT TGTTCTTTTGTCATCTTCAATTGGTGCCACAGTTCAGGATTTGTTTTATGTTGTAGGTAGTTCAGGAAAGATACACGGGTCAGTAGCGTCTTCTATAAAT AAAGATACTACCGATGCTAACATGAATAAGAGTTTTGATCTAGTTAATGATAAAACATCCTTAGATCCACAATCTCGCACTGTTTCCTCGGGCGTGTCTA GTGACAGTAGCATTGAACAAACTGACACTAAATCAAGCTCACAAGTAGAGTTGGGTGGGTCTAGTTCTGTGAATTCTCAAATAACCAAGGAGGGGAGTGG TATAGAAACTTCTGATGCAGCAGCTTCTAATGCACAAGAATCTGTGACTTCACTTAGCAATGGTGCACATTCAGCAAATAGTAGCTTGCCTGCTAAACCC CATCCACAAATTGATTTGCCTCTGGCTGCTGCCAATTCTTCCAGGGCAGAACCTACAACATCTAATGAGGCCTCTACGTCTTTTTCTGATTCCAATTCAA CAGCAAATATCACATCGTCTGCTGGTGCGGTTAATTCAGATTGCAGTTATCTTTTTGCCTAGCAAAAGCTTGTTATCAGTTTATCATTTTATTTAACTCT CTTGTTTTACCTAATTATAAGTTATAACACTAATTTGTTTGTTTTTCATTGGTTTATTTCTTTTGGAAACATACTGAAGTGCAGTATCATAATTAGCTTC ATTTTATTAATTTTAACTCGTTAACTTTGTCCTGTAAGTTTTGTAACTTGGTAATTGCTATGATGATCTGGTTTGTACAACACCCGGTTGTTATCTGTCC AATTAACTTTTAACAAGAAAATTGGGTAGAGAATGCTTCCGTCTTTATTCATTGGCCATATATACACCTACCCCCACACATTAGAAGTTGTTCCATTATG GGATATAGACTTTGTTTGGTATTGGATACTGAATTATTTATGAGCAGTGGACCCGCTGAGCATTTGTATTAAGTGCCAAAGCAATGTTGGGACCTGCATT TTGGTGGTTTCAAATTTTCAACGCTGTCTTTACTATTGTGGTTGCCATCACCAATTTTCCGTGAATTTTAATATATATATACACACACACACACACATAT ATATATAGAGAGAGATTATTTACTTTTTGGTCAGAATTTTTTTTTTGCTGTGGCCAATGATATAACAATAGTGGTGCTGCTATCCATATACTTCTGTGAG TACTGGGGTGAGAGCTTCAAATGAGATTCCTTGCTTCCACCAGTTTAGCTTGATTTTTAATTTGAGAGTTTTACTGAGTATGAATGCTTAATTTCTGTTA AGTAGCATGCTCTGTTTTACTTTGGTCTCAGTTCAAATTCTGAATTAGGTTAGTTAAGAGATTTGCAAAAATTATTAGATTTACTCTGGCTTGGGATAGG GAGCATATAACTACACACATTGTGACATTGCCATGTAGCCCGCTAAAGGTTGTCTAAATCATACTTACCGCGGAGCCAACTCCTTATGAAATTGCCATGG TGGTGTATGATTGGTTATGCTGTTATTTATCAGATGCAATAGTTGGAGCCAGTCTCACTTGGGCAAGCCCATGGATATTTATTGACTCACCATTCATTTA TATCATATTTTACCTATTTGTTGTTCCCAGGTTCAGTTTCGGGGGCAATTTTCATGTCAGTCCTTATGTTTGACCCTCTGTCACAGTTTAGCCTTTCACG ATCTGCATTTAGTTGACTGTGATCTGTATCATGGAGATTGGATATATGATCAATCGGGACCATTATACACAAACAATTCTTGCCCTATAATAACACAGAT GCAGAATTGCCAGGGTAATGGAAGGCCTGACAAGGATTATGAGAACTTTCGGTGGAAGCCCTCTCAGTGTGACATCCCACGATTTGATCCCAAGAAATTT TTGGAGCTGATGAGAGGAAAGACCTTGGCTTTCATTGGAGATTCAGTGGCTCGGAACCAGATGGAATCAATGCTGTGTATTCTCTGGCAGGTAGAGGAAC CGAAGAATCGGGGAAATCGTAATATGCAACGATATTATTTCAGGTCCACATCTGTAATGATTGTCCGGATATGGTCGTCATGGCTAGTGAAACTAACATC TGAGCCATTTGATTATGCTCCTGCTGGTGTGGATAAGCTCTTTCTTGATGTCCCTGAGGAGAAGTTGATGGAACACATCCCAAAATTCGACGTGGTTGTT CTTTCTTCCGGTCATTGGTTTGCAAAGCAGTCTGTGTATATTCTTAACAATGAGATAGTGGGAGGACAGTTGTGGTGGCCAGACAAGTCTAAGCCAATGA AGATTAACAGTGTTGATGCATATCGTATATCTGTTGAAACAATTCTCTCTGCTCTTGTGACACATCCAAATTACACAGGGATTACAATCGTGCGTTCCTA TTCGCCTGATCATTATGAGGGTGGGGCATGGAACACAGGTGGATCATGCACCGGGAAGATTAAGCCTCTCTCCCCTGGTGAATTGGTGGAAAATGGGCAT ACAAATGACATGCATCAGCAACAGGTTACAGGTTTCAACCTTGCTATAAAAAAGGCAACAAATAGATCAAAGTTGAAGTTAATGGATATCACTGAAGTGT TTCAGTATAGGCATGATGGTCACCCTGGTCCATATAGGAGTTCTGACCCGAACAAGATTACAAAACGTGGCCCCGATGGAAGGCCTCCACCACAGGATTG CTTGCACTGGTGCATGCCAGGTCCTGTAGATACCTGGAATGAACTTGTGTTTGAAATCATCAAGAGAGAACTTGATGGATGAGTTGCATGATGAGAATTA TTTAGTTACTGTCTTTTTTTGCAATCTGGCTGCATGTTATGCTCAATTTGTTAAGAGGGTGACATGTCTAGAAATGTCTGTCTAGAGAGAGGTAAGAATA GTCCACTTATATCTTTTTATAGAATAATGTTATGCTATAGAGAAATTAATTTACTTTCAAGGATTTTGGGTGATAAGCTGCTAGATTATTAGTCCTCAAT TATCAAAATCCACCGTACTCCTTAAAGGGACTAAATTTGTTCATGACCAAGTTCTTCTGATTTCAAGGATGACTTTTCATCGTGTACATTAGTTGTAGTC ATCGTTTGTTATTGAGGCACTAGTGTCCATGGGCCAAAATCTGTTTTCATTTCACGTGTCAAGCATTTGATTTTTTTGGTATTTTCTATGCATCTTCCAG AACTAAACTCTTTCTGTGTGTGTGATTCTCTCTCCCAATAAGTGTTACTCTCATGAATCGAAC
• Tissue: pods
• Gene name: LI_gene_185776;
• Additional information: details;

Expression of Ll_transcript_300696

FPKM

• PAB: 1.2
• PNAB: 1.9
• PS1: 2.3
• PS2: 0.9
• PS3: 1.8
• PW1: 1.2
• PW2: 0.9
• PW3: 1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_300696

• Blastp: Protein trichome birefringence-like 18 from Arabidopsis with 76.69% of identity
• Blastx: Protein trichome birefringence-like 18 from Arabidopsis with 76.27% of identity
• Eggnog: Pfam:DUF231(ENOG410XREJ)
• Kegg: Link to kegg annotations (AT4G25360)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427843.1)
• Pfam: PMR5 N terminal Domain (PF14416.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;