Ll_transcript_299879

• Id Trinity: TRINITY_DN51548_c1_g2_i5
• Name Transcript: Ll_transcript_299879
• Sequence: TTACTTACATAATTGAATCTTGCCATTTTCATTCCAATCATGAAAATTTGGCAAGTGAAATCATGATTTTTGATGAAAAGAAAGAGTAATAAAATATGTA ATGTTACAAGATGATATTCAATTTTAGCCCTCGGTCTTAAAATTTAGGAATTCATCAAGCAATTTGTCAAAAACTGTATGAGATTAAGTAGCAAAATATA GACCTAAATCACATCGAAAGAAACAAATATGAGTTCTTGAATTAGAACTTTAGAAGTGTCTATACCACTGGATTTTTACTTTTATTCAATTAAAATATAG ATATGTGGTGCATGTGATGAAAACGGTTCTAAAATACAAAAGAAGATTTGATGGTATTTATGTAATAAAAATGAAGAAATAAGAGGCAGAAAGAAAGAAC TGCCCTTTCTTCATCTTATCTTAATCTTTCTATCTCTCTCTCTCTCTGATTGGAATTCGAAGAAGATGCAGCAGGGTGGATATGCAGGAGGTATGGTTCC ACAGCAACAGCAACAGCAACATGAAGCGTACATGATGATGCCACCTCAGCAACCTACCAGCTCCGATGAGATCCGTACCCTCTGGATCGGCGATCTCCAA TACTGGATGGATGAGAATTATCTCTATACCTGTTTCGCTCACACCGGCGAGCTTGCTTCACTCAAACTCATTCGAAATAAGCACACTACCCAATCAGAAG GTTATGGATTTCTCGAGTTTACCACTCGTGCCGCTGCTGACAGAGTACTTCAATCATATAACGGTACCATTATGCCAAACGGTGGCCAGAACTTCAGGAT GAATTGGGCAAGTTTCAGTGCCGGTGAGAGGCGTCATGATGATTCTCCTGATTACTCCATTTTTGTTGGAGACTTGGCTGCAGATGTTACTGATTACCAT CTCCATGAGACTTTTAGCGCTCGTTATTCCTCAGTTAAGGGAGCCAAAGTTGTAATTGATAGGCTCACCGGAAGGACTAAGGGTTACGGTTTCGTTAAGT TTGCAGATGAGAGTGAGCAAATCAGGGCCATCACTGAAATGCAAGGGGTTCTTTGCTCTACAAGGGCCATGCGGGTTGGACCAGCATCTAATAAGAACCC TACCACTCAACCTAAAGCTCCATATCAGAATCCTCAGGGGGCACAGAGCGAGAATGATCCAAATAACACAACTATTTTTGTCGGCAATCTAGATCCTGAT GTCACAGACGACCATCTTAGACAAGTTTTCGGGCAGTATGGTGAGTTAGTTCATGTGAAGATTCCGTCAGGCAAGAGATGTGGGTTTGTCCAATTTTCAG ACAGGGGCTGTGCAGAAGGGGCGCTGCAGGCTTTAAATGGAACCATTTTAGGTGGACAAAATGTTCGGCTTTCGTGGGGCCGAAGTCCTTCAAACAAACA GACTCAAACAGATCCGAACCAGTGGAATGGTGGTGGAGGATATTATGGATATGGTCAGGGTTATGAAAATTATGGTTATGCTCCTCCTCCTCCTGGACAG GACCCCAACATGTATGGCAG
• Tissue: pods
• Gene name: LI_gene_185796;
• Additional information: details;

Expression of Ll_transcript_299879

FPKM

• PAB: 31.4
• PNAB: 34
• PS1: 27.8
• PS2: 18.3
• PS3: 19.2
• PW1: 29.3
• PW2: 30.8
• PW3: 29.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_299879

• Blastp: Polyadenylate-binding protein RBP45 from Nicotiana with 68.04% of identity
• Blastx: Polyadenylate-binding protein RBP45 from Nicotiana with 70.44% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463041.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;