| Id Trinity | TRINITY_DN51557_c3_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_300230 |
| Sequence | AGAGTTGTTAATTTACTAGCTTTTTTTCCTACTTTGTTCAAAATTACTTTCCATTTTTCAACTAAGTTTTTTTTATAAATATTATTACTTTAAATTTAAA ACAAAAACTGCCAAAAGACACAAGTTTTATATAAACCATTGCTTTATTGATTGGATGAAAATAAACCCCCGAGAGCTACGCTTTAGGGAATGCTATGAGA AACAAAAATAAAACAAACACAACAACATATTTGTTCTTTTGATTTGATTTAGACAAAGGCATAAAGAACAACATTATTTATTCCTAACCTCTTTTCTCTA TCACTTCCGAAGCTCTATGGCTTTTTTTTCCTAGGGTTCACAGCTAGTGCTTTCTCTTCTATAACAGGTACCCAATTTTATTTTTCATTGTTATGATTGG AGTATAAATTCAATGATCACCATTTTGAAGATTTAATCATTGTTATTTAGTGTTAAATTCATAATTTTAACGTTTTGGCATGCTTTTTCATATATGTTGC ATGCGAATATAGATTAAAGTGTGCTATAAACTTTGCTTATATTTTAGGATCAATGAGGGTCTTGAATTGTGATTTAGGAAATTGATATTAATTGGGTTGG GATCAAGTTACTCCAAGAGTAACTCTTTTAGACTTATTTTTCATCTTAGTTATCAATTTCTTGGAAATCCAATGGTGTAGATCTATTCATTAATTCAAAC TATTGGATTTCCAATAAATTGATGACTAAGATGAGGAATAAGTCTAGAAGAATTATTCTTGGAGTAACTTGATCCTCCTCTTTATTAAATTATGTTATTG CCAATTGTGGTGAGATTGTTTTTATCAATTCAGCTATGTTGGATGGTTCTAATTCAGGATTCATGAAAAGGAATTGAAGAAAAACTTAATTTCTTAGTTC ATAAAAACTGAGATTGGAATAGATGAAATGATGAATCAATATAAAAAAAATCAAATAATAATTAAGGATTAACATATATAAGTTATTGATTCCCTTTACT CTTAGATTTAGAGATAATATAATAGAACGATTTGAAGTGTTTAATAAAAAATATGTCTTTTTTATTTCATTCTTTCAAGGATCATAGAATATAGTATAAG TATCTATATATTTAATGCCCGAAAATTATGGGTCAAGATTTGATATGAAACTTACTTATATACTTATTCATTTAGTTCACAAAAGAATATGGTTTCACCA ATCTCAACATATTTTTGTATATCCATAATTGGTTTCACTAGAATTAATCTTTGCACACTTTTGATTTTTGTTGTAAAAGTTTAGCAATGGATGAGGGTGG AGGCTCCAAACTAAGTGGAATAAGGCAAATTGTTCGATTAAAGGAAATACTTCAAAAGTGGCAAAATGTAACCTTAGGTCCAAAAACTTATGATTCAAAA AGAACTTGTCCTGATCCAAGAAGAACTAGTTCTGAACCAAGTTGTGGTGCAACATCTTCTAGCATATCACCATTAATTAACAAAAGGATAACAAGTGTTA TAGGTTGTGACTCAGATGAAGAGGGTTGCCTAAGTCCTGAACCACCCCATGACGTTCCGAAAGGTTACTTAGCAGTTTATGTTGGGCCAGAACTTCGGAG GTTCATTATTCCTACCACTTACCTTAGCCATTTTCTATTCAAAGTGTTGCTTGAAAAGGCTGAAGATGAATATGGTTTTGACCAAAGTGGTGGCCTTACT ATCCCATGTGAGATTGAGACTTTCAAATACCTCCTGAAGTGCATAGAGACTAATCCATCTGGAAAATCAGAAACTTTGGAAGAGTGATTACTTGCTTTGA ACTTTATGGACCAGATCATAGGCTGGCTTCAAATGTAAAATTAGTTTTCCTTTGCTTCTATTTTTTTGTGCTGATTTGGTATGTGAAGAATGATAGGATA CACTAGTTAGAGATATTTCAAGGTCCTTGGTAACAAATTATAGGTAGAAAGGTTATTATACCTTTGTTTATTCTCCATCATGGTATAAAACCTGAATTTG ATGTTTCCATGAATTATGTACTTTTCTAACTAAACTATTTTAGCTTATTCATTATGTAACAACTTTGAATTTTTAATGAGACATTATCACATGGTGTGAA AATGAATACTAGTGTGGTGTGGTTGTCGTATAACTATAAGTACATGATTTTTAGTTATGTGGTTCCCATGCATATATCATTTGATTTTATTTCTCCTTAT TTATACTAGTGTGTAGTGTGTAGAGGCACAAAGTGTCTGCCGATCAATATTGTATGATACTACGTATTCAAATTTTATAATTTTTTGTGCTTATTGTAAT GCTCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_185883; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_300230
| Blastp | Auxin-responsive protein SAUR32 from Arabidopsis with 53.42% of identity |
|---|---|
| Blastx | Auxin-responsive protein SAUR32 from Arabidopsis with 55.07% of identity |
| Eggnog | Auxin-induced protein(ENOG410YXA2) |
| Kegg | Link to kegg annotations (AT2G46690) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414483.1) |
| Pfam | Auxin responsive protein (PF02519.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |