Id Trinity | TRINITY_DN51558_c2_g1_i2 |
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Name Transcript | Ll_transcript_298967 |
Sequence | GAACGGAAAAAGAGAGACAAATCTTCTAACAAAGTATGCTGCAACATTCATTGACTTGCTTCCTCTCTCTCATGTTCCTCGACCAGTCAACCCTCTTCCC TGCATTTTCAGCCACACCCATCTCAGATTTTAATTTTCAGATTCCATAGCAACACCATAAACAGTAAAAAAGAGAGAACTTGGACCTACCCAGAATCCAA TTTCACCATATCATCAATCTTCACTGTGATTTTTGGTTGGTCAATGAGGTCAAGATGTTATTTTGCTTGATGGGTATCGTGTAGATCGAGTAATATCAAA AGGGGTATTTGGATTAGAGAATAAATTCAATTGCTTTATGAATGGTTATGAAGGTTGGGGTGTTTGACTAGTAGTGTGAGTGAAACATGGAGAAAGTGGC TTCATCTATTATACTTTCCTTTCTTATTTGTGCAATTTTGGTGCTTAAGGTTTCTGCCAATGCAGAAGGCGATGCCCTAAATGCACTGAAAAGCAACTTG GATGATCCTAACAATGTTCTTCAAAGTTGGGATGCTACCCTTGTCAATCCCTGCACTTGGTTTCATGTTACTTGCAATAGTGATAATAGCGTGACCCGTG TCGATCTTGGAAATGCAGACCTTACGGGTCAACTGGTTCCCCAACTTGGTCAGCTCCCATATTTGCAGTACTTGGAACTTTATAGCAATAATATATCTGG AAAAATCCCAGATGAGATTGGTAATTTGACAAACTTGGTGAGCTTGGATCTTTACTTGAACAAGTTAAATGGTCCTATACCGAATACACTGGGCAAGCTT GCAAATCTGCGTTTCCTGCGTCTCAATAACAACAGTTTGTCTGGAGGCATTCCGATGTCTTTGACAACCGTTTCTTCCCTGCAAGTTCTTGATCTCTCAA ACAACCAGCTTAAAGGAGTAGTGCCGGTGAATGGTTCATTTTCACTATTTACTCCCATCAGTTATTCAAATAATTCTGGATTGATACAACCAAAAAACAC TCCACCTGCGCCACTTTCTCCACCGGCAGCAACATCTTCAGGTAACAGTGCCACTGGAGCTATTGCTGGAGGAGTTGCTGCTGGTGCTGCCCTGTTGTTT GCAGCCCCTGCAATCGCACTTGCATATTGGCGCAGAAGGAAACCTCAAGACCATTTCTTTGATGTTCCTGCTGAGGAGGATCCAGAAGTTCACCTTGGTC AGCTCAAAAGGTTTTCTTTGCGTGAGCTGCAAGTTGCTACAGATAACTTCAGCAACAAACACATTCTTGGTAGAGGTGGATTTGGAAAGGTTTATAAAGG ACGCTTAGCTGATGGCTCTCTTGTAGCAGTAAAAAGACTTAAGGAGGAACGCACGCAGGGTGGGGAGCTGCAGTTTCAAACTGAAGTTGAAATGATCAGC ATGGCAGTGCATCGTAATTTACTTCGCCTCCGTGGTTTTTGTATGACACCTACTGAAAGGTTGCTTGTGTATCCTTACATGGCTAATGGAAGTGTAGCAT CGTGTTTACGAGGTACCCTTTTTCTTTTACTCTCTATTGAACTGCTTTGTCATACTTGACTTGACTTTCTCCTGTATAAAACTTCTCTGATATTGTTTTC TGATAGAAATGTTAGTGTTAGTTTTAATGTCAATATTGTTTCTTGTTTGCCATCATATATTGTTCAAGAGATAACGGTTATCTATTTCATAGATGTTATC CAGATTCCAGCACAGCAGCACCCATACAAAAATGTAGAAATTTATAAATAGATCAAATGCAAATGGATGATCTTACTGTTGAACTTCAATACTTGGAAAT GTGTTTATGTATATTAACTGTGCTGTAGACCGATTTGATGGTAGTCCACCACTCGATTGGCCAATAAGGAAACGAATTGCGCTGGGTTCTGCTAGGGGGC TTGCTTATTTGCATGACCATTGTGACCCTAAGATTATTCATCGTGATGTCAAAGCTGCAAATATATTGTTGGATGAGGAATTTGAAGCAGTTGTTGGAGA TTTTGGTTTAGCAAAACTTATGGATTACAAGGATACTCATGTTACTACTGCGGTACGTGGTACAATTGGGCATATAGCACCAGAGTACCTCTCTACTGGA AAGTCTTCAGAGAAGACTGATGTTTTTGGATATGGCGTGACGCTTCTTGAACTAATAACTGGACAGCGGGCTTTCGATCTAGCTCGTCTTGCCAATGATG ACGATGTCATGTTGCTTGATTGGGTTAAAGGACTTCTGAAAGACAAGAAGTTGGAAACACTGGTAGACGCAGATTTACAGGGAAATTATGTTGATGATGA GGTAGAACAGTTAATCCAAGTGGCCTTACTATGCACACAAGGCTCCCCCACGGAAAGACCAAAGATGTCTGAGGTTGTCAGAATGCTAGAAGGCGACGGT TTGGCGGAAAAATGGGAGCAATGGCAGAAAGAGGAGATGTTCCGACAAGATTTTAACCACCTTCATTACTCTAATGCAAATTGGATAGTAGACTCAACTT CAGATATCCAACCAGATGAACTATCAGGTCCTAGATGATAAGTAAAGATACACGGAAACACAATCCTGCCCCTGATTTGTGCATATGATATGATTTTATT ATCCCTTTTTTGAAATTATCTTCATGTTTAATGAAATTACATGCCCCATTGACCATGTTGTTAGTATTAAAACAGAAGAAGTTTGTAGTTTGTGTTGGGT TGTGAAGTTGCAAGATGAAAGTGTAGGCCACAAGTGAAAGTAGTACCCATCACTTCTGTCATTTGTATGTATGAGAAATTAGTATAGAGATCATTATGGA AATAAATGCAATTTTATTATCATATTCAGATAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_185896; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_298967
Blastp | BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 from Arabidopsis with 82.4% of identity |
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Blastx | BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 from Arabidopsis with 79.52% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (AT4G33430) |
CantataDB | Link to cantataDB annotations (CNT0000466) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419320.1) |
Pfam | Leucine rich repeat N-terminal domain (PF08263.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |