| Id Trinity | TRINITY_DN51562_c3_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_298717 |
| Sequence | TTGCATTTCTACTATTCTTTCTGTATATATACTATTCTAGCATGGTACTACATATTCAGTTCTTTATTGAGGATTTCTTACCCTCTTGCATTTCTACTAT TCTTTCTGGCTATAGCTATGTGTAGTTCCATTCTGTCATTATTGCTTCCAAATGAATGTATCTTGTATTTGTGGCCACCTGAGGTGGGTGAAGATGTTGT AGTTTTGTCGTCAAATTGATGTCCATAGCTAACTACACATGCAAATTTGCAGTGAGTTATTCTTCCTTCTATGGGAAGAAGATAGACCCTGAGCCGGGAA GATGCCGGAGGACTGATGGGAAAAAGTGGAGGTGCTCCAAGGAAGCTTACCCAGACTCCAAGTATTGTGAGCGCCACATGCACCGTGGCCGCAACCGTTC AAGAAAGCCTGTGGAATCACAAACCATGACACAATCACCATCCACTGTGACATCAGTGACTATTGCTGGGAGCAGCAGCGCGACTGGAAACTTCCAGAAC CTTGCTGCAAATGCCTTTGATAATCTGCAAGGTAGTGGTTCGGGAACCGGCCTTACCGACTACCATCTAGATTCCATTCCCTATGGGATTCCAAGTAAAG ATTACAGGTATGAAGAAATCCTTGTTATATTTCACAGCACTCTGTTACTCGGAAATGGAAAAATAATTTGGCTAGAGGGAATAGAACAGAAAGTATTTCA TCAATGTCATATTGCTTGACATATTTAACGGAACTTCCTTTACTAGTTTTTCATGTTCATGTGTCGTGATATAGGCGTATGATTTTCTGACTATGATTAC CATTTGTCTGTAATCTTGATATGCATAGGTCATGGATTTCTGATTTGTTTGTGGATGTTACTGTGTTTTATTGTCTTTTTTAGTATTGGGTGGTTCTCTG ACTTGTGGGCTAGGGATTCAGTAGACCATGAATTGAAATTCTCTGCAAACTAATTCTTGTTCGTTACTTTTAAAAAAGGAGATAGAAATACGGTTCTTTA ATTACCATTCTAGTTTCCTTTTCTTTGCATTAAATCAAAGGGTGTACTGCATTTTATTTCTGTGAAACATAGTCCTTTCTAAATTTACCCACTAAACCTT TCTTTTTATCACTTAACCCCTTGTTTTTTAAGAGAAAAAATTACATTGTTAGTTAAATCAAGACAGAACATAAGGCATGGAATCAGCCTTGGAACAATTA GAGTTGTGGCGTAAAGTTGTAGATCAGCAACCTCTTACAAATGTAAGGTAAGGCTGCCTATTTTAGACCCACACAGTGGGCTGATCCTTACGCGGTTCCC TGCACATAGCGGAAGCTTTATGCCATTTACTATGGAATGTAAGACACAATGCACGCCACACGACCTTCCCATTACAGAACAAAGTTTTTTCACCACTTAA CCTCTATAGAGTTTGGTTTTAAGTGTCTGGACATTAACTTCTGTTTGATTTAAACTGAAAAGCGATGTTTATAGCAAAATGATTTTCAAGGGGTGTAGAA AGGTGCTGGAAAGAGACATATGGGACGGGAAGAAAAAAAGTGAGAAATGTGATGGAATGGAAGAGAGAAAAGCTGATAGGAAGAATGGTAAAAGGTGATG TAAGAGAGAAACCGGTAAAAACAGTAGACTCGTTTCATTTAAAACCAAACTACATGGAACCGTTAAGTGATAAAAAATTAAATGAGTGTTTACAAAGGGT TGCTTCCGGGGGATGAAAATGTACTTTAGAATGCTAATATGCAGCTCTGTGGAGTGTCTGCAATATCTGTCGAACAGGGAAAATTGAGAAAGGTAGGTAC AGTGGGTGAGAATGTCTTACAATTTTGTTTTTGGTAGAAAGAATGTATTTCCTTTATAACTTATGAACAAAATGGTGTGTATCACTTTCTCTTCATAGCT GTATCACAACTTCATTACTTCATTCCTTTTGACATCAAAACTCAAAAGTTATAACATGAAAGATGATTCTATTCTATTGAATATGACGTTACAATTAAAT ATCAAATTAATGATGCTGGTGCTAAAGGGTTCTCCGAAAGAAAAGACATATCTTTGAATTTATGCCCAAGTATTGGCTCTAGCCAAATTTGTTAGGGAGA CTGCAGTCACTGGTTGAACTGAATGATGTGATTACACTCAGACAAGTTTATACTTTTAACGGAACCTCAATTTAGTAATTTCATCTTATAATTTTCATTA GACCACTGTTGCTTCCACAATCTTTGTTGTACAGTAGAGATTAAGCTTTGATTTCATTGAATAATAGCACTTTGGTAACTAGGATAGAGCTGGTAACCCT GTGTAGTCTGCTGCTCTTTACCTTCTTCAATTTGTTCCTGTTGCTTATGTAATAATCACTGCCATGAATCATGATTATTTGTTTGTACTATTCTATTCCA CGTGGTCGATAAGGCAACTTGTTCTATGATAAATTTCAGCATAAAGTTGCAGAATATGTTAGCAGTACTGTTATTTCTCATCCCTTGAACTAAACAGGTA TCTTCAAGGACTTAAATCTGAAGGTAACGAGCACAGCTTCTTTTCTGAAGCTTCCGAAAGCAACAAGGTCCCCCGAATGGAGTCACAGCTAGAAAACACA TGGCCTTTGATGTCAACCAGATTTGCTTCTCATTCTACAATGAAATCAAGTAATAATCCCATGTTGCAGAATGATTATCCACAACATTCATTTTTATCTA GTGAATATGCCTCAGGAGAAGCTGTGAAGCAGGACGGTCACTCTCTTCGACCTTTTTTTAATAAACCGCCTAAAAGCAAGGAGTCATGGTTTTGTCAGGA AGATGAAAGATCCAACCAAACATCTCTCTCCACAACTCAGCTCTCGATATCCATTCCCATGGCATCTCCCGACTTCTCTGCAACGAAGTCTCAATCCCCT GCATGATAACTAAAAACAGCCCTTCAGGATTTGCAGTGCCATGTTATGAAAGGAGTGAACAAGTGCACTGGAATATGTCCCATGTTAATGTATTTCATTT TTATCTATAATAATAATGATGCATTTTCTGCAGAGTTGTGTGCAACATTATGGAACCTCATCCTTTTGTTATAAGCAAGACCATATTTACTGATATGATG GGTTATTTGTGGAACCATCAAATATTCTTCCTTTTGTAACCTAATGAATCTATAACAATATTTCATTCCTGAATTATGATAATTGCTTAATAAAGTTGCT AGTCTGTTAATGATTTAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_185927; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_298717
| Blastp | Growth-regulating factor 5 from Oryza sativa with 54.31% of identity |
|---|---|
| Blastx | Growth-regulating factor 5 from Oryza sativa with 54.31% of identity |
| Eggnog | growth-regulating factor(ENOG410YFT7) |
| Kegg | Link to kegg annotations (4339928) |
| CantataDB | - |
| Mirbase | osa-MIR396d (MI0013049) |
| Ncbi protein | Link to NCBI protein (XP_019454355.1) |
| Pfam | WRC (PF08879.9) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |