Id Trinity | TRINITY_DN51562_c4_g1_i11 |
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Name Transcript | Ll_transcript_298741 |
Sequence | GACGGAATTGGAGAAGAAAACAGAATTAGTTTATCTGCCACTCTTTGATATCTCCGCCCTCTCCTGTCTTCATTCTTCATCCTCCTAACTCCCACGCACT TCTTTATCTCCCTTCTTCATATCAGATCTCTCTCTCTCTTCATTTCGTCATTTCTCTCTCTTCATTCGTAAAAAATGCATTCCACTCTCTCGCTCTCTTT CTCCGCCGCCACAATCTCCAAACCACACCACTATACCTCTCACTCTCTCCCCTTCACCACCGCCAAGCCACTTAATCTCCGATTTTGTGGATTGAGGAGT GAAGTGTTAGGTTTCAATGCCACTTCTCTTAATCGCCGTCATGTTCAGCTTCCTTGCCGTAGAAACTCCAATACAGTAGTATCGGCGGCGCTCTCTAGCA ATGGCACACCTCCTAAATCATTCGATTATGATTTGTTGATTATTGGAGCCGGTGTTGGTGGCCACGGTGCTGCGCTTCATGCTGTCGAGAAGGGTTTGAA AACAGCTATTGTGGAGGGAGATGTGGTGGGAGGAACATGTGTCAACAGAGGATGCGTTCCTTCAAAAGCTCTTTTGGCAGTGAGTGGTCGTATGCGGGAA CTAAAGAGTGATCATCATCTGAAGTCATTGGGCTTACAGGTTTCAGGTGCTGGATATGACAGACAAGGAGTGGCTGACCATGCTAATAATCTTGCTACCA AAATCCGTAGTAACTTAACGAACTCGATGAAAGCACTTGGAGTAGACATACTTACTGGTTTTGGAACTATTGTGGGTCCTCAAAAGGTGAAAATTGGCTC TTCAGACAAAATAGTAACTGCAAAAGATATCATCATTGCCACGGGTTCTGTTCCTTTTGTTCCTAAGGGCATTGAAGTGGATGGAAAAACTGTGATTACC AGTGACCATGCACTCAAGCTGGAGTCTGTTCCTGATTGGATAGCAATTGTAGGAAGTGGTTATATTGGCCTAGAATTCAGTGATGTATATACAGCACTTG GAAGTGAGGTTACTTTTGTCGAAGCTTTAGATCAGCTTATGCCTGGATTTGATCCTGAAATTAGCAAGTTGGCTCAAAGGGTTCTTATAAATCCCAGGAA TATTGACTATCACACTGGAGTTTTTGCATCTAAAATCACGCCTGCAAGGGATGGAAAACCCGTCTTGATTGAGCTCATTGATGCAAAGACCAAGGAACCG AAGGACACTTTGGAGGTAACATATCTTTTCCTGAGAGATTTTAAGTTTATCTCTTTGTTTCAAACTGTTAACATTATTTCGCTCACGTGAAAGAAGGAGA AGGTTATTAATTCTTAAAATTAGATTGGTGAACTATGTAGGCAGGGATCAGGCTCATATAGAATTGTTTAGTTTCACTATTTGTGATTACCAATCGTCAC ATGCTTTGTAGGACACCCATGCTCTCATGGTAAGACAGCTTGTCAGTTAACTCAGACCACATTTCAAAAACCAACAAGTGATTAATCATGTTAAATTATT ACAAACTGTCTTTGCTTTGCCACAGGTGGATGCTGCACTAATAGCAACCGGAAGGGCCCCTTTCACACAAGGTCTTGGATTGGAGAATATTGATGTGGTA ACACAACGTGGTTTTATTCCTGTGGATGAGCGCATGCGAGTAACTGATGCAAATGGCAACCTGGTGCCAAATTTATATTGCATCGGTGATGCTAATGGCA AGATGATGCTTGCTCATGCTGCCAGTGCACAAGGAATTTCAGTGGTTGAACAACTTACTGGAAGAGATCATGTGCTCAACCATTTAAGTATCCCAGCTGC TTGTTTCACTCATCCTGAAATCAGCATGGTTGGGTTGACAGAGCCTCAAGCAAGGGAGAAAGGTGAAAAAGAGGGTTTTGACGTAAGTGTTGCCAAAACA AGTTTTAAAGCTAATACAAAGGCCCTAGCAGAAAATGAAGGAGAGGGAATTGCCAAGTTGATATACAGACCTGACAATGGAGAGATACTAGGAGTTCACA TTTTTGGTTTGCATGCAGCAGATCTCATCCATGAAGCATCCAATGCAATAGCATTAGGGACACGTATTCAGGACATTAAATTAGCAGTTCACGCACATCC AACTCTGTCGGAGGTTCTCGACGAGCTATTTAAATCAGCCAAGGTAAAAGAACAAGCTTCTAGCCCAGTAAGTGAATCAATTGCTGTCTAATCGTCCTCG GGTATAAATTTCTGAAGAAAGTTGCTTTTACTAGGGATTTCCAAAATATTACACATCTTCAGGCCGAGGATCTCAGCACATTCAGAATCCTGTAAAAGAA GAAAAGTGTTTAAATGAGACCATTAATGGCCAGATAATGGATGGCCGCCAAATGTTACAGGATTTGATATCATTTGTTGATGGTATTATTAGTGTCTGCC AAAGATTCATATCATTATTACTGCATTTTTTAGAGAGTATCCTATTTTAAAGTGGTTTAGTTTTGCACTAAAACATGTCCTTTTTTTATTCAAAAGTCTT GATGAAATTGACATCGTTGTCATACTTATCGACTGCCTAAACTTATAGCTTGGAATTAGTCTTTGATATTTTTCCTGTTCCCTTGGTTATGCATGCCATA ACCATTAGCATCAGTTTATCAATATTTATTGGTATTGCAAGACCGGTCTTAAGTCCAAAGAAATTAACGTTTATTTATAGGTTAAGTAGCTAACTTTTCT TTTTCGACTGCAGTAACAATAAAAATTCTTCTAGTGGTTGGCCAAAAAATTCCCTACAATTTACATTCTCCCTATAACGCTAAAATTACTCACACAGTGG TGAAATTTTGCTTCGATTGCCTAGTCGCACAATAAAGGAAGTTACTAATGGGAGTTATGCTTCAAAAGTATTTAGCCAAATTACTTGGAAACTTACAAAT TGGGGCAACTTTCCACCGTTCACCTTCTCCCAACCTTTCAAACGCTACAATCCTTCTATAAATGCCATTTGCAGAGAGGATTTGAGGCAACTGGTTTAGG GTTAGGCTTTTCCGGGTTCCGAGGTGAATTGGGATAACTTAAAGAGTACTGGTTGGTTAGTTGATATTATATGGGACATGGACAAATTTCTCCTACTCCA TTGATTCTAAGTGTCAGTGAATTAGC BLAST |
Tissue | pods |
Gene name | LI_gene_185930; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_298741
Blastp | Dihydrolipoyl dehydrogenase 1, chloroplastic from Arabidopsis with 78.98% of identity |
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Blastx | Dihydrolipoyl dehydrogenase 1, chloroplastic from Arabidopsis with 78.98% of identity |
Eggnog | dihydrolipoyl dehydrogenase(COG1249) |
Kegg | Link to kegg annotations (AT3G16950) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019464345.1) |
Pfam | Pyridine nucleotide-disulphide oxidoreductase (PF07992.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |