Ll_transcript_299442

• Id Trinity: TRINITY_DN51564_c3_g1_i3
• Name Transcript: Ll_transcript_299442
• Sequence: TCTTTACATTGATAATTCACCAAAATTACACAAATATTTACTTACTAATAAAGTATGGAACCAAAGTAACATGTCATGTAAGTTATGTTAGATCTAGATA ACTAGATAAGGTTGTCTCTGAAATCTCTGAACTTTTCCATTACCCATACACAAATTCACATCATCCCTATACAACTAGTAAGAATCCAATAACAAAACTT GAGAAAAAAAATCGGTTTTTTATAACCAGAAGAAGAAAGTTGGTGTGTGATTATTAATAACAATGCTGGGTGTTTCAACCTTAACTTTGGGCTCATCAAC TGCAATGGTAGTTCAGAGCCAAGCTCAACATACCAATCTTAATGGCAAGGTGTTAGCACTCCCAGGAAGTAAAAGACAAAGCCTTTCTTATAAGACAGAT TCATTGCTTTTTGGTTTTTTGCCTTCTACTATCTCCTTCAATGAATCAAGACCTGTTAGACCCTTTTCAACAGCTGCTGCATCTGTTGATTCTGACCAGA TCAGTTCTTCTGATCCTGCCAACAAGAATGAAACGAAAAAGTACTATTTTCTAGTTGCAAATGCAAAGTTCATGCTGGATGAGGAGGAACATTTCCAAGA ACAATTATTTGAAAGGCTTCGTTACTACGGAGAGAGTGACAAAGAACGGGATTTCTGGCTTGTGATTGAACCTAAATTCTTGGATAAATTCCCTAACATT ACCAAGAGATTAAAGAGACCGTCTGTTGCTCTCGTGTCAACCAATGGTCCCTGGATCACGTAAGGACACCAATTTTTAATTTTTATTCAGTGATGGGTTC TACAATTGTTGTTAACAATGGAGTCATTGGAGTGTATGAACTATGAAAATCTAATGATGCATTGGTGCTTGGAGTGGCTATCATAAACTACAAAATGAAG ACTATTCCTTCCTATCATCTGCATCAGTATCAATGAGCATTGTGTCATGAGGAATCTAATTTCCTCTCAAGCAGAGTTATGGATACCCTTCATTCTTCAC TTTTCCTTCGTGGAAGTGTTAGTTTAAAAAAAGACGGTCTAATGCACAAGGCTTTCACCTAGTAGGGTCTAGGGAGGGTTTATGTACGCAATCTTATCTT CACAAGACTATTTCCAATGGAAGTGTCATTTTCACATGTTTAAAAGTGAAAATGGGTTCATATGCTTGTTTTTCTCTACTTTTAGTGTCTTGCCCTGGCT GATAGGAGCTCCATCCTTTCAAATGATATATCTGTGAACACTGTTTTGAAAAGGAAATGTGGTAATGATAGTCAGACAAAAATTGCTTGCCAAGAATGTT GCAATATAACATCAAATGCAAGTTTCTGATGTTTTAGGCTTTTAGCATTCAACTAACTTGTAGCTTATTCTCTATCCGTGTTTTTTCGCAGATTCATGAA GTTAAGACTAGATAGAGTTCTAACGGACAGTTTCGAAGCTGAAGGCTCGGAAGAAGCATTAGCCTCAAGTCCTACCAACCTGGAGTTTGACAAACCAGAC AAATGGGTGGCGCCCTATCCTAAGTATGAACCCGGATGGTGGGAAAGTTTCTTGCCCCCAGGACAGAATGAGGTGAAGGCCTAGAATATTTTTTCACTCT TTTTTTTTTTGCTGCTACTTAGTCTTAGGAAATCTTTTATCCAAGGATTTTTATCCATGTATAATTAAGCTGCTTGTTGAAGTTGTACATTTGCACTCAG TTTTGTAAACTTTGGAAGGCAAATATAAATGAAGTGTCTCACCCTTAGGATCTATCTAAGTTTCAGGAATTGCATTTGTATGGGTCAAATGAGAAAAGTA TATATAACATTATGATGAATTTTATGTTTTCTGTTGTAAGGATTGCGTGTAAAAAGGACTCATATTCAGATAATGTAAGGGCCTGAGTTAATTATAG
• Tissue: pods
• Gene name: LI_gene_185945;
• Additional information: details;

Expression of Ll_transcript_299442

FPKM

• PAB: 0.6
• PNAB: 1.9
• PS1: 1.6
• PS2: 1.8
• PS3: 1.4
• PW1: 2.4
• PW2: 1.9
• PW3: 1.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_299442

• Blastp: Uncharacterized protein ycf54 from Porphyra with 40.79% of identity
• Blastx: Uncharacterized protein ycf54 from Porphyra with 41.33% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462259.1)
• Pfam: Protein of unknown function (DUF2488) (PF10674.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;