Id Trinity | TRINITY_DN51569_c0_g1_i17 |
---|---|
Name Transcript | Ll_transcript_300950 |
Sequence | TTTGTTTTCTGTTTTTTTAATGATTGGGAACATTGCTTATGATTGTGTATTTCCGTTGTTCATGTCTGTAACTGATTCTTTTGGTGCTTTCACAATGATC TTCTGGAACTCCTAAGTTGGGTTTATCTGCAAGATTTAGTTAATCAGTAACATTTTTTTTTAAATATTGGAAGTGGAATGATCACTGATAAGCAGTCTGG TTTTCTTGATACACTCAAAATGGAGCGGGTTAGAACTATTCTAACCTACACTTACCCTTACCCTCACGAGCATTCCCGCCATGCCGTAATTGCTGTTGCT ATTGGTTGCCTCTTTTTCATCTCATCCGACAATATACAGACCCTTGTAGAAAAATTAGACAACAATATTAAGTGGTGGTCTATGTATGCCTGCCTGTTTG GGTTCTTTTATTTCTTTTCATCACCATTTATAAGGAAGACTATCAAGCCGAGCTATTCAAATTTCAGTCGGTGGTACATAACCTGGATTTTAGTGGCTGC TGTATATCATCTACCTAGTTTTTTGTCAATGGGGGTGGACCTGAGGATGAATCTATCCATGTTTCTGACAATATATGTTTCTTCTATAGTGTTTCTTCTT GTCTTCCATATTATATTTTATGGCCTCTGGTATATCGGCCTTGTTTCACGTGTGGCTGGAAAGAGACCAGAGATCTTGACAATTCTTCAAAACTGCGCTG TGCTTAGTGTGGCCTGTTGTGTATTTTATAGTCATTGTGGTAACCGCGCCATGCTGAGAGAAAGACCGCTTGATCGAAGAAACTCTAACTGGCTTTCTTT CTGGAAGAAAGAAGAGAGAAACACATGGCTTGCTAAGTTTCTCCGAATGAATGAGTTGAAGGACCAAGTTTGCTCATCTTGGTTTGCTCCAGTTGGATCT GCAAGTGATTATCCTCTTTTGTCGAAGTGGGTTATTTACGGCAAGATACCTTGCAATGGCTCATGCCCTGGTTCATCAGATGAAATTTCCCCAATCTACT CACTTTGGGCCACATTTGTTGGACTTTACATTGCAAATTATGTGGTTGAAAGGTCAACAGGGTGGGCTCTCACTCATCCGTTATCTGTTGAAGAATATGA GAAGTTGAAGAAGAAGCAGATGAAGCCTGACTTTTTGGACATGGTTCCCTGGTACTCTGGAACATCAGCTGATTTATTCAAAACAGCTTTTGATCTCTTG GTATCTGTAACTGTTTTCGTTGGGCGTTTTGACATGCGTACGATGCAGGCAGCAATGAGTAAGGTTCACGATGGAAATCAACAAGGTGATCTTCTATATG ATCATTTCAGTGAGAAGGATGATTTTTGGTTTGACTTCATGGCTGATACTGGTGATGGTGGGAATTCATCTTATACTGTTGCACGGCTACTTGCTCAGCC TTCCCTTCGTGCACTGAAAGGTCTTTCTGTGCATACCCTACGTCGTGCAGACTTGCTACTAATTGGAGGTGATCTCGCGTATCCTAATCCATCAGCCTTT ACATATGAAAGGCGTCTCTTTCTTCCTTTTGAGTATGCTCTCCAACCTCCTCCTTGGTATAAAGCAGAGCAGATAGCTGTAAACAAGCCTGAGGTACCTT GTGGGGCTCAACTGAAACAGTACAGCGGACCTCAGTGTTTTATTATTCCTGGAAACCATGACTGGTTTGATGGACTGCAGACATTTATGAGGTATATATG TCATAGAAGTTGGTTAGGTGGATGGTTCATGCCCCAGAAGAAGAGTTATTTTGCTTTGCAACTCCCTAAACGGTGGTGGATTTTTGGGCTTGATTTGGCG CTACATGGTGATATTGATGTGTACCAGTTCAAATTCTTTTCTGAATTGGTAAAGGAGAAGGTTCAAGAGGATGACTCTGTGATCATTATAACTCATGAAC CAACTTGGCTTACTGACTGGTATTGGCATGATGTTACTGCAAAGAATGTTACACACCTCATTAATGATTATTTAAAAGGAAGATGCAAGCTTCGAATGGC TGGGGACTTGCATCATTACATGCGTCATTCTCATGTAAAGTCAGATGGGCCTGTCCATGTTCACCATCTACTTGTAAATGGTTGTGGTGGAGCATTTCTG CATCCCACCCATGTTTTCAGCAAATTCAATAAACTCAATGAAGTTTCCTATGAATGCACGGCAGCATATCCTTCCTTCGATGATTCGAGAAGAATTGCAT TAGGAAACATCCTGAAGTTTCGAAAGAAGAACTGGCAGTTCGATTTTATTGGGGGCATTATATATTTTATACTGGTGTTTTCAATGTTTCCACATTGTCA GCTGAGTCACATCCTGCAACATGATACATTTTCTGGTCACATAAGGAGTTTCTTTGGAACTGTGTGGAATGGATTTATATACATCTTGGAGCACTCTTGT GTATCACTAGCAGGAGCTATACTATTGCTAATCACAGCTTATTCTTTTGTTCCATCCAAAGTGTCACGGAAGAAGCGAGCAATAATTGGACTTCTTCATG TTTCTGCCCACCTCGCTGCAGCTTTGATTCTCATGTTACTTCTTGAACTAGGCGTTGAGATATGCATCCGGCATAAATTGCTGGCAACTTCAGGGTATCA CACTTTGTATCAGTGGTATCGGTCGGTGGAAAGTGAGCACTTTCCAGATCCAACTGGCCTCAGAGCTCGTATCGAACAATGGACATTTGGACTTTATCCA GCATGTATCAAGTATCTAATGTCTGCTTTTGATGTTCCAGAGGTCATGGCGGTCTCGCGAAGCAATATTTGCAAGAATGGGTTGCAATCTCTATCCAGAG GGGTTGCTATGACATATTATGCTTCTGTCTTCCTTTATTTTTGGGTCTTCTCAACCCCAGTTGTTTCCTTAGTGTTTGGGAGCTACTTATACATTTGCAT CAATTGGCTTCACTTACACTTCGATGAAGCCTTTTCTTCTCTCCGAATAGCCAATTACAAAGCATTCACACGATTTCACATCAAATCTGATGGTGATCTC GAAGTTTTTACTCTGGCTGTTGATAAGGTTCCGAAGGCTTGGAAGCTTGATCCTAGATGGGAGGGAGAGACAAAACATCCGCAACAGTTGAGCCATATGA GAAAGTTTCCTAGCAAATGGAGTGCAGCTAGTTCCCATCAAGATCCATTAAAAACGGTCAAAATTGTTGACCATTTTGTTATTGAACGAACAAATAAGAA AGACAGTGGTAATGTAGATAAAGAGCCAGTTCAATGATCCATTGATCTAGTTCCCCTATTTGTAACATTATTTAGGAAGCAATTTAAAGAAATGGAAGGA AAAAAAGTAGGTCCTTTATCTGTTTTTCACCTCTTATCTAATTTTGCTAGTTCAATTGTCATTGATATCAAAATAACGGGAGCACATCTCATAAGCTGTG ATTGGTTGAAAAAAGTGCACTCAAGTTAAAAATATAATTATTAAATATTTTTTTGACCAATTACAACTCATAATACATATTGTGGGATATAAGATATGCT CCGAAAATGACAAAGTACCTGATGGTAGTGTCTCCAATTGTAAGTTATTTTTGAATAAATCTTGCTGACCATTAAAGCATTTGCCAAAAGAATTACAACT GAGGGâBLAST |
Tissue | pods |
Gene name | LI_gene_185977; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_300950
Blastp | - |
---|---|
Blastx | - |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019430699.1) |
Pfam | Calcineurin-like phosphoesterase (PF00149.27) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |