Id Trinity | TRINITY_DN51570_c0_g1_i6 |
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Name Transcript | Ll_transcript_298687 |
Sequence | GTTAGTAGTGAAGCATGTCTGTTACTAAAGTAACTCCTTCAGTGAGGCGTTATCCGTTTTAGAGAGAAACTAAAACAAAAACAAAAAAACAAAAAACTTT TCTTCTTTTAGATCTTGCAAAAACCCCTAAACTTTTTTTCCCTCACTTTTCTTTCTTTCCTTTTTCTTTCTTTCCTTTTTCCTTCTTTCCTTTTTCCTTC GTTCCTTTTTCCTTCTTTCTTTCTCTGCATTACACTTCATTCCCAATTCCTCGAATTCCCATGAAAGTAACCATGACGTTGTGATTCACATAAATGGATG ATCGAGGTGGATCGTTCGTTGCTGTTAGGAGAATTTCGCAGGGTCCATGCCATTCAAGTTCTGTTAATCAATGAGTCTTTGATTCGGGATTGAGAACCGG GTTTTTACTTGCGTCATGTTTGCGGATATCACAAATTGCGTTGCTGAGATTGTAGCAGGATCTACAGCATGGCTCGGTAAAGGTCTTTCTTGTGTCTGTG CTCAGAGAAGAGAGAGTGAATCACGTCCTTCTTTTGATTTAACTCCAGTACAAGAAGAATGCTTGCAGAGGATACAGAGCCGTATAGATGTTCCCTATGA TAGTTCTATCCCTGAGCACCAGGATGCCCTAAAGGCTTTATGGGATACTGCATTTCCTGAAGAAAAACTCCATGGCTTGATTTCTGAACAGTGGAAGGAA ATGGGCTGGCAAGGGAAGGATCCATCAACCGATTTTAGGGGTGGTGGTTTCATATCATTGGAGAATTTGCTGTTTTTTGCTAGAAATTTCCCAGTATGTC TGTTTCTTATTTTATTCATTCTTTGTGATGCTATAACTAATATTTTGGAGCATTTGTTTCGACACGGACCCAAACGAATGTTCTTTTTTGCATGCTCATA TCCCTTGCTTCCTTGCATAGTTTCACTATTTTGGTGGTGAAGTGTAGATTGCATGTTTCATTTGTCACGTGGTTGTCGATTTGTTTCGTTTAGGTTTTAC TAGACATGGGTTTTATCTTACATGTTTTACTAGACACATTTTTGCACTTCTATGAGACCCTTTGCCCCCGTGTTTTGCTCTTTGTTAATCTACTATTGGT TCAATGGTTCTCAACTGTCTTGTGAATCTTAAATCTAATAAGTCATCTTTGCTATTGGTATCTCTTTCTCATAATGCCTGAACTTTTTATTCTGTAGAAA TCCTTTCAGGATCTTTTACGGAAGCAGGAAGGAGATCGATCAGTTTGGGA BLAST |
Tissue | pods |
Gene name | LI_gene_185980; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_298687
Blastp | ELMO domain-containing protein A from Dictyostelium with 43.75% of identity |
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Blastx | ELMO domain-containing protein 2 from Homo with 45.21% of identity |
Eggnog | ELMO CED-12 domain containing(ENOG410XRXC) |
Kegg | Link to kegg annotations (DDB_G0278051) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019459126.1) |
Pfam | ELMO/CED-12 family (PF04727.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |