Ll_transcript_298072

• Id Trinity: TRINITY_DN51574_c0_g4_i1
• Name Transcript: Ll_transcript_298072
• Sequence: GATGAAGAATGGAAGCAGCTGGAAGAGTCTATTCTCAGCAATGTGGTTTTCGTACACAATCAGTTATTTGGATCTTTTGATCTTGTCCAAATTCCTGGAA CATTCCAAGTTTCAGATGCAGATCGGTTGCTTTCCTTCATTGACACATATACATTGGGTACCGATTTAATCAAAGGTGTCCACACTTCAATGTTGCCCAA CTTAGATGCTAAACTGATGCCAGAGCACTTGTTTTATCTCTGTTTGGACTATAAAAGGAAGTTTCTTTCATCTCATAAAACTGTTACCAGATACAATTTT TACAAGGATTCAAATGCTCCTGAGATGGCAGACATGTTGAATGTACTAACACCTATACAAAAGGAGATTCTTCCCCTTCTAAATGAGTGGGAAGATCAGA ATGATCTTCAGAAATTTTTGGATATAATTGACATGCTCTTGAGTCTTCCATCGGGTATCCCTTTAGCCAAGGCCTTCTCAGGGTTGCAGTTTTTATTGCA CAAGGCACAAGTTATGCAAGAAAGTGGTTCAAAGTTTTCCCTCTCAAATCAATTCAAATCTGTTTTTGATCTGTTGTCGTCATGGCAAAAGATGGAACTT GGGTCTTGGCCCACTCTGCTTGATGAGGTCTTGGATCAGTTTGAGAACAATGCTGCAAAATTGTGGTTTCCTCTGTATTCTGTTCTTCAACCCAGTGAAT CTTCTGTTCAATCAATTGTCCAAAGCTTGGAGGACTTCATTCACACATCCAGCATTGGTGAATTCAGGAAACGCCTTCAGCTTATATTTGCTTTCCTCGG TCAAAACCATATCAGTACATGCCTCAAAATTAATTCCAGTCCTTGTCGGATGGAACAGTCGACATTCTTGTACAATATATTTGGATTTTATGTCCAGTTT TTACCAATTGTATTGAAGTACATTGATGATAGTAGGAAAGAAATTGACACTGAACTTAAAGCACTAGTGAAACTTTGTCGATGGGAGCATGGTAAGAGTT ACTTATCTCTTGACAACTTGAAAAAGAGCAGGCAGAAGTTGAAGAAGCTTATACAGAAGTTTACTGATATTCTGCAAGAACCTGTGCTGATCTTCCTTAA GCAAGAAGCTGCACATAATGGAGCAAAATCTCAATTGTTTCAAGGTCATAAGCTCAGTTATAATGTTCTAAATAAGGGCTCAGTCAATGGTGCTTTTGAT TTGACGCTTTTCAGTGAAGAAAACAGGTCGGTGTGGTTTGAGAACTGCAGCAAAAAACTAGACTGTGCTTTGCAAAAGTTTTTTAATGTTCTGTCTTCAC ATGGGGAAAATGTTAAAGATGTTCTACGCGTATCGATACCTTGTGGTGATTCTGTGCATGAACTTAACGTGAAGGGATGGGAAGCTGTATGGCATATGGT TGAGCAAATTTATTTTACAGCTGTTGACTGTGGTGATTTATGGAAAGAAGAAAAAAAGAGTAGAGGGAAGAGAAGAGCTTTAGCTGAGCTTCTTAAGCTT TTAGAAAGCAGTGGGTTGTCTCGCCACAAGTCTACATATAAGGAGGATCAGATTAAAACATGGTGGTTCCTTCAGCTTTCTGGGAACATGGAGCATTTAC TTCCAAGCAGTAATAAATTAGCATTTGTAACCTCAGAAATTGCTACTGTAGTTGAAAATAAGGATGGCCCTGAAGAAAAATTATTAATAGAGTGGAAAAC AGGCACTGAACACTATTTCAAGAGTGTTGTATCTGTGCGCCATCTGCAGGAGATATGCGACAATCCTCATAAAGATATAACTCTTGAGCAGGTTGATAGG TCTAGATCTTTCATAAATCAACTAGTCGAGATACAACAGAAGCAGCTTGCTGCTGCCAGTGCTTTTGACAAACAATTGAAATGCTTAAGAAACTGTGTGT CCACTCTGGGAAAGTGCTCCTCTGCTGATGACAATACTATTTATGCATGCTCTATCATTCCTAAACAGCTTTCCACTTATAAATGCATGTGGCAACAAAA GCAATTGTTTGATAATTTGTATGCTATATCACATGAAGAGTTGCTTTTATTAAGGACGTTAGAAAATAGCCATTTAAACACATGCCAAAACACAAGACCT TCAGTCAGTCAAATGATTGCTTCCATTGAAGAATTTTTGCCAGTGTTTTGCAAATCCAAGGAGTCACTGGATCGTTACCTAGTTGGGAGGACAAAAGCTG TAACTGCTGTGGGTTCTTCCTCACAACTCTGTTTTGTTACTCAAGAAATGGAGCAGCTGGTATGTGAAAACTTCAAGGCAATAAAGGATTTTAAGGAACA TTTTCTTGCACAATGGGAGAGAGCACTAGATAAAAGCACAGCTAAAGAAGTTTTGATTCATCATTTTGAAGAAATAATTGAGACGGCAAAATTAATCGAG GAAGAGTTTACCACGTCAAATTCTAATCCAGTAGATTCATATGGCAAGGATAGATTTTGTACACAGAACCTTGCTGAGCTTAATGCAGGGTTCGATGAAT CTCTTACGTCTACGTATCAGCATATTTCAACTGTGTTGCAGAATTTAATTTTGTCAAGCAACATCGCTATGGTTGAAGACGCTGTGGTAAATATTGGTTC ATGGGAATTTATATCTGACTCAATTGTTTCAACTCTCAGTGTGGACGTACTATGTGAGAATGTTTACAAAACTATCACTTATGGGGAGAAACTGGTGAAT CATTGTGGCAATGAAATCAACAATTATTCTTTGAAAGTAGGAGCCTGTTTTAGAGATCTGCATATGTTCATGGATCTATTTCTTAATTTCGGTGATGAGC TCATGAATAGTTTCTTGACCATGCACAGATCAGTATCGTTGACAACTCATGTTATTGCAAAGATTTTAGCTTCTTTATTTTCCAAAGGCTTTGGAATTTC AAATGAAAATGAGGAGAATGATGGAACCGTCGATACATCTGAAGATGCAAGTGGAACAGGCATGGGTGAGGGTGTTGGATTAAAAGATGTCAGTGATCAG ATCACTGATGAAGATCAGTTACTGGGAACACGTGATCAGCCAAATGATAAAGAAGACGACTCTAAGGAAGTCCCAAGTAGCAACACTACAGGCATTGAGA TGGAGGAGGATTTTGCAGCCGATGCAGTAAGCCTTAGTGAGGACTCTGGAGAAGATGAAGATGAAGATATTGATGGTGAGAATAATGAACTTGATTCTGA AATGGGCCCGACTGGACCAGACAGTGAAGCAGTTGACGAGAAGGTTTGGGATAAGAATGAAGATGAAACCCCTAATGATACAAAAGAAAACTCTGAACCT GGACCTTCAGTTAAGGATAAAGATGGAAGCACAAAGGAGCTAAGAGCCAAGGATGACTCTGCCACAGATGAGCCTGGGGGTGATAATGGTGATGAAGGCG ATGCTCAGAATGATGACATTGAAACCCAGGATGACATTGGTGAAGAGAATGAAACTGAGTTAAATATGGATAAAGAGGCAGCTCATTCTGATCCTAATGG GTTGAATCCTGATGAGCTGGAACAAAAGTCTGAAGTGGAAGATCCTATGGAAGTGGAAGACACAGATCCTATGGAAGTGGAAGATCCGGAAGAGCAAGGT GATCCAGCAGAGAATGGAAACGATAACCAGGATGAAGAGACATACCCAACCGATGAAAATATGGAAGAAGCACATACTGAACTTGATCTGACCTCTGAAA AGGACGAGCAATGTCCGGACCATCAAGACAATGCTGACATGAATTCCACAGAACCAAGGAAAGATACATCTGAACCCTCTAACTTGGTTAATGAACAAGT TTCCTCTGCTGAGTTAGCATCACAGTCCAAGGTTGATCAGCAAACATCTGGTCCAGAAAATATGGCATCAGAATCAAATTGGTCAAATAGTGATCATGAC ATTGACAATCCTTCTCTCTTGGGAGGCTTTCCTTCCACTGGTATGTCTGATATGGATGTTAAGATGTCAGATTCATCAAACACTGGGGGGCTCAGGGAAA GCCAACCTAAATCTCATCTTCCACAGGACGACCATTCTTCTTTCCAGGAAAATCAACCAAATCCTTATCGAAGCATAGGTGATGCACTTGAGTACTGGAA AGAAAAAATTAGAGTATCTGGTGATATTGAAGGAGATGATATAGACGAGAAGGATAAAATGGAAGATGATAATGCTGCTGATGAGTATGGTTATGTTTCT GAATTTGAAAAGGGGACAGATCAAGCATTGGGGCCTGCTTCATCAGAACAGGTCGACAAAAATATTGATGCTGATAAGCTTGATAAAGATAGTCATGCTG GAGAAAAAGATGTACAGTTGCAGTTTGAAAAGAAAAAACCTGAAATAGATTCTGTAAACAATTCATCATTAATCCCCAAAAATGAAAAAAAGGATCAATT GAATGCATCAGCCATAGAAAAATCGCAACACGAAGAGTCAGTGAAGCCTATCACTATGGAGAATAATGATCCTGAAAATCAGCCTAAAGATTTGATTTCA TTCAAGAGATCATACATTAGTGAGAACACAGATAGACTAAATGAACTTTCAGTTGAAGACAATGATTTGGGCAAAAGCCATGATCCAAGTGATGACCCTA GTGATATGAAAGATAATGCCACTGCGCTGTGGAGAAAATATGAACTTAGCACAACAAAATTGTCTTTGGAGTTGGCTGAACAATTGCGCCTTGTAATGGA GCCCACTGTGGCAAGCAAACTTCAAGGAGATTATAGAACTGGCAAAAGGATAAATATGAAGAAGGTAATTGCATACATTGCAAGTCACTATCGTAAAGAT AAAATATGGCTCAGGCGGACCAGACCCAATAAACGTGATTACCAAGTGGTGATTGCCATTGATGATTCACATAGTATGTCAGAGAGTTGCTGTGGTGACG TCGCTGTTGAAGCTATGGTTACAGTATGTCGTGCTATTTCTCAGCTGGAAATGGGGAGCTTAGCGGTTGCAAGCTTTGGAACAAAAGGAAACATAAAGTT ACTGCATGATTTTGATAGGCCATTTACTGGAGAGGCTGGGGTTAAGATGATCTCAAATTTGACATTTAAGCAAGAGAATACGATTACTGATGAGCCAGTT GTTGATCTGTTAAAGTTCTTGACTAACAAGCTAGATTCTGCAGTTGTAAAAGCACGACTTCCATCTGGCCGTAGCCCCCTGCAGCAACTTGTTTTAATAA TTGCGGATGGTCGGTTTCATGAAAAGGAAAACTTGAAGCGTTATGTTAGAGATGTATCAACCGGAAATCGAATGGTTGCTTTCTTGCTTCTGGACAATTC TCAAGAGTCTATTATGGATCTCATGGAAGCATCTTTTGAGGGTGGAAATATGAAATTTTCAAAATACATGGATTCGTTTCCATTTCCTTATTACATCATT CTGAGGAACATTGAAGCACTGCCAAGGACTCTTGCAAACCTACTTAGACAGTGGATGGAGCTTATGCAAAATTCAATGGACTATTGATTAGTTGAAGTAC AGTTCTTCCATTTTGGAGTGGAAGACTCAGAAATTTTGATCTACTTTGAAACATATTCTGTGATTCTCATTTTGTAAAGCTTTGACATAGCTCATATAGT ATTTCAAATGTACAGATGATTGTTTCATTGATTAGCTAAGTTTTCTGAGTTCCATTCTTAATATATTAGATTATAAATGTCTTGCAGTTAATCCTTTTAA GAGGCTAATTCAATTTGTATTTTTAGTGTACTTATTCAACATCTAAATGACTAAAAAACATTGTCATAAAAAATATAATAAAAAACTAGCAAAGGATCTT CTTTCT
• Tissue: pods
• Gene name: LI_gene_186004;
• Additional information: details;

Expression of Ll_transcript_298072

FPKM

• PAB: 0.1
• PNAB: 6.5
• PS1: 3.6
• PS2: 2.5
• PS3: 3.8
• PW1: 2.6
• PW2: 1.6
• PW3: 1.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_298072

• Blastp: Midasin from Schizosaccharomyces with 29.73% of identity
• Blastx: Midasin from Schizosaccharomyces with 29.82% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (SPCC737.08)
• CantataDB: Link to cantataDB annotations (CNT0000139)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425405.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;