Ll_transcript_298879

• Id Trinity: TRINITY_DN51578_c3_g1_i1
• Name Transcript: Ll_transcript_298879
• Sequence: ATAGGCTAATTTGTAAGCTGTTGAGCCTCGCACATAACTTGATTTGATTCATTTTTGACAGTTATCGGAAAAAAAGGAGATGGCATTTCCCAAACCCTCA CTCAAGAGCTACACCTCTCTCATCTCTCCGCGCCACTCACCCTTCATTCCCCCACCACTCCTCCACCGCCACCACCGCCGCTTCTTCTATTCAACCGAAA CCGATGACGCCGCCGCAATCCCCAAACTTGAACCCTCAAACGACGCCGAATTACTCTCCAATATCCTCCTCCAACACCACAACCCATTCCACGCAATGGA ATCATCTCACCAACTCAACGGTATCACTTTCACTCCTCACCTTCTTTCTCAAACCCTACTTCGTCTCAGGGATCACTCCAAAATCGCACTCTCTCTTTTC AATTACTCCAAATCTTTACCTAATTCGCCTCTTTCATCTTCTTCGTACAATCTCCTTGTCGATATCATGGGTAAGGTTAGACAATTCGATGTTGCGTGGC AACTGATTGTCGAAATGGATCAGCAGAACCTCGATTTAACGTCTTCTACCTTCTCCATAATGATACGCAGGCTTGTTGCTGCTGGGCTCACTCGCCAAGC AATACGGGCTTTCAATGATATTGATAGTTTTGTGGAGAAGAAGACCAGTTCTGAAGATTTCTGCATTCTGCTTGATACGCTTTGTAAGTATGGGCATGCG AAAATGGCTGTTGAGGTTTTCAATAGAAACAAGCATAGGTTTAAGCCTGATGTGAAAATGTACACAGTTTTGATATATGGGTGGTGTAAGTTGGGTAGAA TTAAAATGGCGGAAGGGTTCTTTAGGGAGATGATGGAGCAAGGGATTGAGCCTAATGTTGTTACTTATAATGTGTTGTTGAATGGGATTTGCCGAAAGGC AAGTCTTCACCCGGAAGAGAGATTTGAGAGAACAGTAAAGAATGCAGAAAACCTGTTCGATGAAATGCGGAAGAGGGGGATTGAGCCAGATGTGACTAGT TTCTCTATAGTGCTTCATGTGTATAGTCGGGCGCATAAGCCACAACTCTCGCTTGATAAACTGAAATTGATGAAGGAAAAAGGAATCTGTCCGACGGTAG TGACATATACTTCTGTTATCAAGTGTCTTTGTTCATGTGGAAGGCTTGAAGATGCCGAGGGTTTGCTTAATGAGATGGTAGGGAGTGGAGTCAGTCCATG TGCTGCAACCTACAATTGCTTCTTTAAGGAATATAGAGGAAGAAAGGATGCAGACAGTGCTTTAAAATTGTTTAAGAAGATGAAAGATGATGGTGTGTGC TTGCCGACTGCACAAACATATAGCATCTTGATTGCAATGCTTTTGAAATTAAATCGAATTGGGGTTGTGAAAGAAATATGGAATGACATGAAAGGGACCA GGGTGGGACCGGATTTAGATTTGTATACAGTTTTAATACATGGACTATGCGAGAACCAAAACTGGAAGGAGGCCTGCCATTTTTTTGTTGAGATGATAGA GAATGGGTTTCTTCCCCAGAAAGTTACTTTTGAGACCCTTTACAGGGGCCTAATACAGTCTGATATGTTGAGAACTTGGAGGAGATTGAAGAAGAAGCTT GATGAAGAATCCATAACATTTGGTTCTGAGTTTCAAAACTACCCATTAAAGCCATATAGGAGATGATTGATAAAACATAAGGTACTTTTGAGACTTTCAT CTTAACTTAATTATCTATCCAGATCATATCTGATGTTCAATTGGTTCCATAGTGCTATTAGTATCTTTGCTCCACTTTTACTCTTAAACGGGTTATTTAA ATTTTGTTCAGAGAATCAACATGTCTATATATCTTATGGTATTTGTATTTTTGTAGCATATCCCAAAAGCTAACAAATGTGAATATCTTCAGCAATAAGA CACTGATTTTAATAATTAATACTTCTGTCTTTCGGTCAAAACTGCAGCTTGGAAAACTAATAAAAGTTAAAAATTGGCAAAAAGGGTACCATGGTCAGTT AATTTGTTAAATTTGGTTTTGGCT
• Tissue: pods
• Gene name: LI_gene_186019;
• Additional information: details;

Expression of Ll_transcript_298879

FPKM

• PAB: 2.5
• PNAB: 4.1
• PS1: 5.2
• PS2: 5.2
• PS3: 6.4
• PW1: 4
• PW2: 3.6
• PW3: 4.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_298879

• Blastp: Pentatricopeptide repeat-containing protein At2g13420, mitochondrial from Arabidopsis with 65.22% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g13420, mitochondrial from Arabidopsis with 65.22% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431042.1)
• Pfam: PPR repeat family (PF13041.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;