Ll_transcript_298998

• Id Trinity: TRINITY_DN51580_c0_g2_i1
• Name Transcript: Ll_transcript_298998
• Sequence: TGTTAGTGTGTGTGATAACGTATCAGAGGAAACGACACTCGTTATCGACACGCACATTATAAACCCATCAATTCAATTTTGATTATTTAAAATATAATAA AAGGAGCACTAAGGACACAACCTCATTCATCTCTCACACACATACAGCTATAAAAAGAGGGAAGAAGAAGAAGAAGAAGAAAAAAAAGAAGAAGGGGGAG GAGAAGGAGGAAAGGCAGAGGGTCCTCTAATCCTCTATTTTTGGGGCAGTGCCAACCATATAAAAGAGAGATTCTTGTAATCATCATCTATATTTAGAGA GAAAGGGAATATCATATATAAATAGAGAGAGAGAAAAGGTGTAAAGTGAGATATGAAGAGTTACGAGACTATCAACAACATTGATGAAGATGAACATGAA GATGTGGAGATTGGAAAACAACAAATCTCTCTTCAATCAACATCTCTCTTCAACATCAACAACAACATTCCAGCGTCTTCAATACACCAAACTCAAACTC AAACTCACCGTCTTCTTTCACTTGATGTCTTCCGCGGTCTCACCGTTGCGCTTATGATACTGGTGGATGAAGCTGGTGGACTCCTTCCTGCGTTAAATCA TTCCCCATGGAATGGTTTAACACTAGCAGATTTTGTGATGCCATTTTTCCTTTTTATTGTTGGTGTTTCACTTGCACTCGCATATAAGAAGCTGTCTTCC AGAGTTATTGCATCTAAAAAAGCAATTTTACGGGCTCTTAAGCTTCTCGCATTAGGCCTTTTTCTTCAAGGAGGTTATTTCCATCGCCTAGGCGATCTGA CATTTGGAGTTGATCTTAAGCAGTTAAGATGGATGGGAATACTGCAGAGGATCTCTGTTGCATATTTGCTTACGGCATCGTGTGAAATTTGGCTCAAGGC AGATGACACTGTTAAGTCAGCATCATCCCTAGTAAGGAAGTACCGATACCAGTGGTATGTGGCTTTGGTTCTTTCTGGACTTTATCTTTGCTTGCTATAT GGATTATACGTTCCTGATTGGGAGTATCAAGTTCCAACAGAACCTTCTTTGGCACCAATGACATTTTCAGTGAAATGTGGAGTAAGGGGTGATACTGAAC CAGCCTGTAATGCTGTTGGAATGATTGATCGTACGATATTAGGCATACAACATCTGCACAGGAGTCCAGTATATGCGAGAATGCCGGAGTGTAGTATTAA CTCCCCTGACTATGGACCATTGCCTCCTGATGCTCCTGCCTGGTGTCAAGCCGCTTTTGATCCCGAAGGGCTTTTAAGGTGAGTTCACTATGTCATCCTG CTAAGATGGAATACTATTATAAGTATAAGTGCCTGGCATTTTCTTGCGAGGTTGTCCTTTATTGAACTTGTGATGCTTGTGATTTGAGTCATGGAAGGCT CATTTTATAACTTAATCCGTTAGGTATAAGCCTAGATTTTCTTTATTCTTTTGCATTTACCTAATTTTGTAATCTATTGCGGAATTACAGTTCAGTGATG GCTATTGTTACCTGCTTGGTTGGCTTGCACTATGGACATATTATTGTCCACTTTAAGGTAATTCTCACACTCTTATGTGTACTATATTTTCTCCCTCTAT ATTATTATCACCAGCATCATCATCAACATAGTTCTTTCTTTATAATATTGATGCATGCAGGACCACAGAGTTAGAATGCTATACTGGATGATCCCAGCGT CCTCACTTGTAGTTTGTGGTCTTACATTGGACTTCTTTGGTATGCATATAAATAAGGTTCTCTACTCCTTCAGTTACATGTGTGTCAGTGTTGGTGCTGC AGGCATCCTCTTTGTTGGGACATACTTGATGGTTGATGTATGTGGATATAGTCGCTTGACTATGATTCTGCAATGGATGGGGAAGCATGCATTGATGATT TATATCCTTGTGGGTTGCAATGTTTTTCCTGTTCTCATCCAAGGATTCTATTGGGGAAGGCCTCAAAATAACCTTCTGAAGTTAATTGGAGTTGGTAGTT GAAGTGAGGCAGGACACAATGGTGGATTAGACTATATACAATTAAGATGGTGAGACATTTTCTGTTTCACTGTCTCTTTGGAAGAGTAGCAGCTACCATG GGATGTTTATCACTAGAGCCTATAGTCTTTGTGTTGAAGAATGTCAATCATGGTCTTCTAGTATCTTCATGGATGATGGATATAAGAGT
• Tissue: pods
• Gene name: LI_gene_186039;
• Additional information: details;

Expression of Ll_transcript_298998

FPKM

• PAB: 1.4
• PNAB: 0
• PS1: 0
• PS2: 0.1
• PS3: 0.1
• PW1: 0.4
• PW2: 0.4
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_298998

• Blastp: Heparan-alpha-glucosaminide N-acetyltransferase from Mus with 30.66% of identity
• Blastx: Heparan-alpha-glucosaminide N-acetyltransferase from Mus with 26.58% of identity
• Eggnog: heparan-alpha-glucosaminide n-acetyltransferase(COG4299)
• Kegg: Link to kegg annotations (52120)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418701.1)
• Pfam: Protein of unknown function (DUF1624) (PF07786.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;