| Id Trinity | TRINITY_DN51580_c0_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_299000 |
| Sequence | TGTTAGTGTGTGTGATAACGTATCAGAGGAAACGACACTCGTTATCGACACGCACATTATAAACCCATCAATTCAATTTTGATTATTTAAAATATAATAA AAGGAGCACTAAGGACACAACCTCATTCATCTCTCACACACATACAGCTATAAAAAGAGGGAAGAAGAAGAAGAAGAAGAAAAAAAAGAAGAAGGGGGAG GAGAAGGAGGAAAGGCAGAGGGTCCTCTAATCCTCTATTTTTGGGGCAGTGCCAACCATATAAAAGAGAGATTCTTGTAATCATCATCTATATTTAGAGA GAAAGGGAATATCATATATAAATAGAGAGAGAGAAAAGGTGTAAAGTGAGATATGAAGAGTTACGAGACTATCAACAACATTGATGAAGATGAACATGAA GATGTGGAGATTGGAAAACAACAAATCTCTCTTCAATCAACATCTCTCTTCAACATCAACAACAACATTCCAGCGTCTTCAATACACCAAACTCAAACTC AAACTCACCGTCTTCTTTCACTTGATGTCTTCCGCGGTCTCACCGTTGCGCTTATGATACTGGTGGATGAAGCTGGTGGACTCCTTCCTGCGTTAAATCA TTCCCCATGGAATGGTTTAACACTAGCAGATTTTGTGATGCCATTTTTCCTTTTTATTGTTGGTGTTTCACTTGCACTCGCATATAAGTCTCCTTTTCTT CAACAGAAGCTGTCTTCCAGAGTTATTGCATCTAAAAAAGCAATTTTACGGGCTCTTAAGCTTCTCGCATTAGGCCTTTTTCTTCAAGGAGGTTATTTCC ATCGCCTAGGCGATCTGACATTTGGAGTTGATCTTAAGCAGTTAAGATGGATGGGAATACTGCAGAGGATCTCTGTTGCATATTTGCTTACGGCATCGTG TGAAATTTGGCTCAAGGCAGATGACACTGTTAAGTCAGCATCATCCCTAGTAAGGAAGTACCGATACCAGTGGTATGTGGCTTTGGTTCTTTCTGGACTT TATCTTTGCTTGCTATATGGATTATACGTTCCTGATTGGGAGTATCAAGTTCCAACAGAACCTTCTTTGGCACCAATGACATTTTCAGTGAAATGTGGAG TAAGGGGTGATACTGAACCAGCCTGTAATGCTGTTGGAATGATTGATCGTACGATATTAGGCATACAACATCTGCACAGGAGTCCAGTATATGCGAGAAT GCCGGAGTGTAGTATTAACTCCCCTGACTATGGACCATTGCCTCCTGATGCTCCTGCCTGGTGTCAAGCCGCTTTTGATCCCGAAGGGCTTTTAAGTTCA GTGATGGCTATTGTTACCTGCTTGGTTGGCTTGCACTATGGACATATTATTGTCCACTTTAAGGACCACAGAGTTAGAATGCTATACTGGATGATCCCAG CGTCCTCACTTGTAGTTTGTGGTCTTACATTGGACTTCTTTGGTATGCATATAAATAAGGTTCTCTACTCCTTCAGTTACATGTGTGTCAGTGTTGGTGC TGCAGGCATCCTCTTTGTTGGGACATACTTGATGGTTGATGTATGTGGATATAGTCGCTTGACTATGATTCTGCAATGGATGGGGAAGCATGCATTGATG ATTTATATCCTTGTGGGTTGCAATGTTTTTCCTGTTCTCATCCAAGGATTCTATTGGGGAAGGCCTCAAAATAACCTTCTGAAGTTAATTGGAGTTGGTA GTTGAAGTGAGGCAGGACACAATGGTGGATTAGACTATATACAATTAAGATGGTGAGACATTTTCTGTTTCACTGTCTCTTTGGAAGAGTAGCAGCTACC ATGGGATGTTTATCACTAGAGCCTATAGTCTTTGTGTTGAAGAATGTCAATCATGGTCTTCTAGTATCTTCATGGATGATGGATATAAGAGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_186039; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_299000
| Blastp | Heparan-alpha-glucosaminide N-acetyltransferase from Mus with 29.73% of identity |
|---|---|
| Blastx | Heparan-alpha-glucosaminide N-acetyltransferase from Mus with 27.78% of identity |
| Eggnog | heparan-alpha-glucosaminide n-acetyltransferase(COG4299) |
| Kegg | Link to kegg annotations (52120) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019418701.1) |
| Pfam | Protein of unknown function (DUF1624) (PF07786.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |