Ll_transcript_300506

• Id Trinity: TRINITY_DN51584_c5_g1_i4
• Name Transcript: Ll_transcript_300506
• Sequence: TGATATTCAAATTCGATAGCGATAAGATTCGAACATTGGATTTTTTTTTTTATTTTGTTTTTAATACTTCTTTTGTTTGGACTCCGTAATCAGTCGCTAT TTCCGATTAAATCGTGTTTTGTCCTAAAGGTTCTAGCAGAATAAATTGTTATTCCCCTCCTCCACACAGAAGGGCTTATTCCAAGTTCCAACATACACAA GTCATTTTATTTTAAATAGCGTTTATTTCCGAACACAAGAAAAAAAAAGATCAATTTAATAGATTTATTATTTCTATAAGATATGATATATCTATAGAAA AAATAAATCTATTAAATCATGGTTTCGCGTATCATACATATCAAATATTTTCTTTTCATATCGATGCATATGAGATTCTGGCGCAATTAATGGCTGCGAG AACGAGACTTTTTGACTTACAGTTTATTATTCTTAAATAAATTCAATATAATATTAATTTGACAGATAGATAAATTTGACAGATAGATAAAAAAATAGAA AAAATATTGCAAGTATATTTCTTACCTTGATCTGAAAAAAAAACTACCAAGTATAGTTTTTTTTTTAGTAATCTTAAATAAATGAAAAGAAAATAGAACA AAGAAGACAATAAAAGAAAAAAAATGTAAAATAGAAAGTAATAACCAAATCCAGTCCGTGTATCTAGGTATCAATAGACCAATACAATAAATTATTTTTA TATTCGAAACCCGTTATAAAAGAGGAGAATGGACGGCTACGAGAAAAAAAGCACATATAAATGAGAAAAGCCTCGAAGGTCCTATCCCTGAAAATGTCAT GAGGTGTTCGGAAATGGTTGAAATAGTTGAATAGGAGGATCACTATGACTATAGCGCTTGGTAAATTTACTAAAAATGAAAAAGATTTATTTGATATTAT GGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTACTCTTTCCTTGCGCCTATTTCGCCTTGGGGGGTTGGTTCACAGGT ACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCAAGTTCCTATTTGGAGGGCTGCAATTTCTTAACCGCTGCAGTTTCCACTCCTGCTAATAGTT TAGCACACTCTTTGTTGTTACTATGGGGTCCGGAAGCACAAGGAGATTTTACCCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTTCACGG CGCTTTTGGATTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAATTGCGGCCTTATAATGCAATTGCATTCTCTGGTCCAATTGCT GTTTTTGTTTCCGTATTCCTGATTTATCCACTGGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGCGTAGCAGCTATATTTCGATTCATCCTCTTTT TCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCTGCCCTACTATGCGCTATTCATGGTGCTACCGT GGAAAATACTTTATTTGAAGATGGTGATGGCGCAAATACATTCCGTGCTTTTAACCCAACCCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGC TTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTG GAGTAGTCGGTCTAGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAAGAAA
• Tissue: pods
• Gene name: LI_gene_186074;
• Additional information: details;

Expression of Ll_transcript_300506

FPKM

• PAB: 16.2
• PNAB: 10.9
• PS1: 8.2
• PS2: 8.9
• PS3: 8.5
• PW1: 12.7
• PW2: 13.7
• PW3: 14.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_300506

• Blastp: Photosystem II D2 protein from Jasminum with 99.34% of identity
• Blastx: Photosystem II D2 protein from Jasminum with 99.34% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0002079)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (YP_008963600.1)
• Pfam: Photosynthetic reaction centre protein (PF00124.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;