Ll_transcript_299162

• Id Trinity: TRINITY_DN51586_c1_g1_i11
• Name Transcript: Ll_transcript_299162
• Sequence: AATAATTATAAAAAAATGAGAAGAAAAGTAAGAGCACTTGAACAAAAAAATAACGAAAGTGAGAAGTGGAAAAAGGGGAAGAAGGAGAGGGTAGCGTAGG AATAACGAAAAACCGTGCACACGGTAAGGACTTTTCAAAATACGCGATTCAGAACCGAATGAGCATAAATCAAAGTAGAAAACAAGGTCCCTCATTTCTG TTTCTGTTTCTGAAATTGAAATTGACTTGAATTTCGCAATTGATGGAAATTTCTGTGAGTGAAGCTATTCGAGATCGCAGAATAGGTGGTCTTGGAAATC TTCGAGTCCTTCCCGATGAAATCCTTTGCGCAATTTTGGAGCTACTTACTCCCCGAGACGCTGCTCGCGTCGCTTGCGTCAGCAGTGTGATGTACATTAT GTGCAATGAAGAACCACTGTGGATGAGTTTGTGTCTTAAAGGAGTGTCTGGTTTGCTTCAATACAAAGGCTCTTGGAAGAAAACTGCCCTGCATATTGAG AATCTGCCGGACAAATATAAAGAGCATGATCGACGACCTTTACATTTTGATGGGTTCAGCTCTCTATTTCTGTACAGGAGGTTATACCGGTGTCATACCA CATTGGATGCGTTTCACGCAGATAATGGAAGTGTGGAAAGAATAAAAGACATCTCTTTGAAGGACTTCTACGACACATATGATGCAAAGAAACCGGTTAT GCTTACTGGATTGGCTGATACATGGCCTGCCAGGCATAAATGGACAACTGAACAGCTATTGCTAAACTATGGAGATGTAGCATTTAAAATTTCTCAAAGG AGTGCTCGGAAAGTCTCCATGAAGCTCAATGATTATGTCTCATACACTGAAGTTCAGCATGATGAAGACCCCTTATATATTTTTGATGAAAAGTTTGGCG AAGTTGCACCTAGCTTATTGAAGGATTATTGTGTGCCTCATATTTTTCAAGAAGACTACTTTGATTTATTAGATATAGATAAACGACCATCCTATAGGTG GCTCATAATTGGACCACAGAGATCTGGTGCCTCGTGGCATGTTGATCCTGCTCTTACCAGTGCATGGAATACTCTTCTTTCTGGCCGTAAAAGGTGGGCA TTATATCCTCCAGGAAAGGTGCCTCTGGGTGTGACGGTGCATGTTAATGAAGACGATGGCGATGTCAATATTGATACTCCATCATCACTGCAGTGGTGGC TAGACTTTTATCCTCTTCTTGCTGATGAAGACAAGCCAATTGAATGCACACAACTACCTGGAGAGACAATTTATGTACCAAGTGGATGGTGGCACTGTGT TCTGAATTTGGACACAACAATCGCTGTCACACAGAATTTTGTGAATTCCAATAACTTCGAATTTGTATGTTTGGATATGGCTCCTGGTTATCGTCACAAA GGAGTCTGCCGTGCTGGACTGCTTGCACTTGATGAAAATAGTTATGAAAATGTCAGACAGAACATGTCATATAATGGACAAAACTTAGGTTACACTGATT TGTCAAGGAAAGAGAAAAGAGCCAAAACTCACAAAGATGTAGATGATGTTATTAACGAAATAACCATGCATGATGCAACTAGAAGCTATAATTTATGGAA AGATGGGTTTTCCTATGATATAAATTTCTTATCCTTGTTTTTGGATAAAGATAGAGACCACTACAGTTCCCTATGGAGCTCAGGGAACAGCATTGGTCAA CGAGAACTTAGAGAATGGTTATCCAAACTTTGGATTCAAAAACCAAAAATGAGAGAGCTAATATGGAAGGGAGCATGCATTTCACTAAACGCTGACAAGT GGTTAGAATGCCTATTGAAAATTTGTGCCTTCCACAATTTGCCCCCTCCCACTGACGATGAAAGGCTTCCTGTTGGTTCGGGTAGCAATCCTGTTTATCT AGTGGGAAACTCTGTTATAAAGATTTTTGCTGAAGAAGGACTGGAAGCTTCACTTTATGGCTTTGGCGCAGAGCTAGAGTTCTACAGTCTACTGCATGAA GTCAATTCTCCAATCAGGAAACACATTCCTAATGTTTTGGCGAGTGGGATTGTTTATCTTGAAGATGGGTCTTATACTAATATCACATGGGATGGAAAAG GCATCCCTGGTGTCATTGCGAAGAGCAATCTTATCATAAATAAGTGTGATGTTGATGGTTTCTCATTTGGGGTATGGAGAAAGAAGCTGTTGGAGTATAG GAATGCTGGAAAGTCAATGGATGGATCAGTTAGTTCAGATACTCACGCAAGCATATGGCCTTATATGATAACAAAACGATGTGAAGGGAAAATGTTTGCG GAGTTAAGAGACAGACTATCATGGGAAGATGCAAAAAACTTGGCCTCTTTCTTGGGGGAGCAATTGGGCTACCTTCATCTTTTGCCACATCCACCATTGA ACATTTTATCTTTCTCTGATATTGAAGATGAATTAATCTTGCCTGATACTAATGGTTCTACTGCAACTGTTCTTTATAAATCAAACACTGAGGCAGAGTG GGGGGTCCTCACCAGAACCTTAGCAAGAAAGAGGAAGGATGTCTCAAGCCGTCTGACCAAGTGGGGAGATCCAATCCCTAGCAAACTGATAGAGAAAATT GATGAATATATCCCACCTGATTTCAGCAAGCTACTAAATATAACCGAGAATTTCTCGAGTGCTTGTAAACCTTGCTCCTGGATACACTCTGACATTATGG ATGATAACATTTACATGGAACCATCATCGGTTTCTACCTCAAGTGAGAATACAGAAAATGTCACCCTTGTAGAGAATGGTTTTCCAGGTAGCATTGATGA GGTGAAATCCTGGCGTCCTAGCTACATCCTTGATTTCAGTAATCTTTCGATAGGTGATCCTATTTATGACTTGATACCAATTTACTTAGATGTGTTTAGA GGTGATTCAGATCTCCTTCAGCGATTTTTAGAGAGCTACAAACTTCCTTTTGCAAATAACATATCAAAGCTTGATGAATCAGTAGAGGGTGGCCAAAAGT TTGCTCGTCTTTCATATGTTGCCATGTGCTATTGTATTTTGCATGATGACAATGTCTTGGGAGCAATTTTTAGTATATGGGAAGAATTGAGATCAGCAAA GTCATGGGAAGAAGTTGAGGTGAGAGTGTGGGGGGAGTTGAACAATTACAAAGGCTTTGCTTAACCATTGGCTGCATCTCAATATTTTTGGAGCCTGAAC GCACAATCAGAGCCCTTTGGACATTGCAAATACGGAACTGCCTCCAACGCACCCAATTAGGCTGGGTCTTGCTTTGAATTCCTCTGTGTTTTACTATGAA ATTCTCAACTCTCCTGACCGTGCTTGCAACCTTGCAAAACAGGCTTTTGATGAAGCAATTGCTGAATTGGATACATTGGGAGAGGAGTCATACAAGGATA GCACTTTGATCATGCAACTTCTCCGTGATAACCTCACCCTGTGGACCTCTGATATGCAGGATGATGGAGCAGATGAAATTAAAGAAGCAGCACCTAAACC TGATGAACAGCAGTAAAAATATTTTGCTGCTTATTAGAATTGAACTTCTCCCCCTTATGTTTTTAAAGGGAGAAAGTACTTGTCCTTTATGAATTATGGT TGTACTTGGCCATTTTAGTTTGTCCTTCTATAGTGTTTCCAAAATGTCTATTTTTCAAGTTTTTATTATGTGGAATTGTAATTTTAAGATTCTTCTTTCA AGTGAACTTGAGTTTTCTGAATTTTAGTGAAAGAGGATGTTAGCTTTATTCATATTCTTTCCAAAAACCTAAAAAATCTTGATTTAATCTTGTTCGGTTT TCTGTGTTTGAGGATTACCTGAGTTTTGAAGGACTGATACCTTGTTTCTAGTAATTTGTGTATGTGCTTCTCGTCATCTCTACTAATGTTGTTGAGGTTT TAGAGCAACAATAATAACAAATAAAATCTTCACTCTTATT
• Tissue: pods
• Gene name: LI_gene_186085;
• Additional information: details;

Expression of Ll_transcript_299162

FPKM

• PAB: 18.6
• PNAB: 16.6
• PS1: 21.1
• PS2: 13.7
• PS3: 19.4
• PW1: 24.3
• PW2: 23.7
• PW3: 13.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_299162

• Blastp: F-box protein At1g78280 from Arabidopsis with 59.67% of identity
• Blastx: F-box protein At1g78280 from Arabidopsis with 59.18% of identity
• Eggnog: jumonji domain containing 6(ENOG410XQCR)
• Kegg: Link to kegg annotations (AT1G78280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415322.1)
• Pfam: F-box-like (PF12937.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;