| Id Trinity | TRINITY_DN51586_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_299154 |
| Sequence | GTTTATCTAGTGGGAAACTCTGTTATAAAGATTTTTGCTGAAGAAGGACTGGAAGCTTCACTTTATGGCTTTGGCGCAGAGGTACTTCAATGGCATTCTT TTCCATTGCATCTGCCGTACAAATCTAACTCTGTATATTTTACAGCTAGAGTTCTACAGTCTACTGCATGAAGTCAATTCTCCAATCAGGAAACACATTC CTAATGTTTTGGCGAGTGGGATTGTTTATCTTGAAGATGGGTCTTATACTAATATCACATGGGATGGAAAAGGCATCCCTGGTGTCATTGCGAAGAGCAA TCTTATCATAAATAAGTGTGATGTTGATGGTTTCTCATTTGGGGTATGGAGAAAGAAGCTGTTGGAGTATAGGAATGCTGGAAAGTCAATGGATGGATCA GTTAGTTCAGATACTCACGCAAGCATATGGCCTTATATGATAACAAAACGATGTGAAGGGAAAATGTTTGCGGAGTTAAGAGACAGACTATCATGGGAAG ATGCAAAAAACTTGGCCTCTTTCTTGGGGGAGCAATTGGGCTACCTTCATCTTTTGCCACATCCACCATTGAACATTTTATCTTTCTCTGATATTGAAGA TGAATTAATCTTGCCTGATACTAATGGTTCTACTGCAACTGTTCTTTATAAATCAAACACTGAGGCAGAGTGGGGGGTCCTCACCAGAACCTTAGCAAGA AAGAGGAAGGATGTCTCAAGCCGTCTGACCAAGTGGTATACTTTGTTATTTTGGGCACTCTGATTTTTTGTTAAACTAAATAGTTTGAATTAGAAGATAT GTAAGAAATGCAACGAGGGAAATACACTATCTTTTTAATGCTTACAATTGTCAATCTTATTATTTTCTGTGTATTTTTTAAGTTTAAAGCCCCAAAGGAG TTTATTTATCAAATTGTTATCAGTTTGGATTTTGAGTGAAGAAACTGCCAATTTTAGCAGTTGTGTTTTTACCAAGTATTTACAAACTTCTGCTTGCTTA GGTTGTCCTTAATTGATGCATGATAATTATGTTTCTTTTGTTGTTTCTGTTCTGTCTATGTGGTTTCTATAACATGCTAGCTTTTATGACGAATCTATGC TAGTCAGGTGATGGCCTCTCATGATTGTTACTAAATTTTGCAGGGGAGATCCAATCCCTAGCAAACTGATAGAGAAAATTGATGAATATATCCCACCTGA TTTCAGCAAGCTACTAAATATAACCGAGGTTTCTTCTAAAGTTCTATATTCAGACATCACTTTTTATTTTCTTAATGGGTACGGTACAGCATTTTTGTTT TCTAAAATATCTGCAACTTTTGTTTGACTTCAGAATTTCTCGAGTGCTTGTAAACCTTGCTCCTGGATACACTCTGACATTATGGATGATAACATTTACA TGGAACCATCATCGGTTTCTACCTCAAGTGAGAATACAGAAAATGTCACCCTTGTAGAGAATGGTTTTCCAGGTAGCATTGATGAGGTGAAATCCTGGCG TCCTAGCTACATCCTTGATTTCAGTAATCTTTCGATAGGTGATCCTATTTATGACTTGATACCAATTTACTTAGATGTGTTTAGAGGTGATTCAGATCTC CTTCAGCGATTTTTAGAGAGCTACAAACTTCCTTTTGCAAATAACATATCAAAGCTTGATGAATCAGTAGAGGGTGGCCAAAAGTTTGCTCGTCTTTCAT ATGTTGCCATGTGCTATTGTATTTTGCATGATGACAATGTCTTGGGAGCAATTTTTAGTATATGGGAAGAATTGAGATCAGCAAAGTCATGGGAAGAAGT TGAGGTGAGAGTGTGGGGGGAGTTGAACAATTACAAAGGCTTTGCTTAACCATTGGCTGCATCTCAATATTTTTGGAGCCTGAACGCACAATCAGAGCCC TTTGGTAAAATATAAATACATGTTTAACTTTATGATAAAAACAAAGTTTAACCTTTCAAAAACCGGAATTTGACCTATCAGTTGGTTGCTTTTTTTTATT GTTTTCTAGTGTTTGATAATTCATAATAAAGTGGCCATTCGGTTGTAGTTGATGCCGTTATAGTTTATGAAGCCATTATATATTAGCATAGATAAACGAT GTTGATTCACCATTTTCTTTGTAAATTCAAAACTATAATACATGAATGTATTGACTACTGAGATAGATGTTCCTTATTGAAGTGGGGACAAGAGGACAAG CACACCCGAAGTTTGTGGCTAATCGATTTCAATCTCGAAAAGGGCCCATCACCACCACACCGAGCCCATACCTTTTTCTTCCAAGTTGATCATGAATAAA TCCACTACGGTTCATTCAAAACAAAGTAAAAAAGAAAATCATTAAACGAGTGACCTTTTTTGGTTGAAAAAGGTTAAAACTTTTCAAACCACCAAAAAAT ATAATACTCTTCCAGGTTGAAACTCCCATCTCATCAAAGAATGAAGATGATTTGTTTCAAGATGGTGCCCATAAGTCTGTCTCATCCAATAACATAATAA TTGTTTTGTTTTTCGGGTAGAGGGGAGCCTTCTGAGGAAGAGTGAAGATAGTCTTTTGGAGTTAACACACCGGGAGTAGCTGAAAATGTTTTCTGATACT TCTTAAGTATATAGAATGAGAGAGTAGAGTTAAGGGCTTAATCAACCTTCTAGGGGGAATCCCCCTCTTTATAGTGATGAGTTTTGTCCTTTGGTTTGGC TTGGACAGTTACAAAACTCCCCACTATGCCACTGGCTCCTTTAATGAAGGAAAGTGTGGGAGACTCAGTTAATGGGAGATGGAAGGATTAATGGGTCCTC TGGTGTGGGAGCCCATTATTGAAGGGAGGATTTTGGGCTCTCTTCGGCAATGGCCCAGTTATGACTGGGGCGGAACAATAATATTACACATGAACCTTTA CAATGGATATTATTTTATTAGTTTAGGCTTATTAAATGTATTTTAAATACTGTTATACTATATTATTGGGCCCCACATGATTAGAGAAATGCAGATTTCA GTTTGAGAGAAAAATAATTTCCTGTATCCAATGTCCAAACTCCATGTTTGACAGCTGTCACTTTCCCCTTTTTCTAAAAAACAAAACAAAACATATTCCA ATTTCCATATATTGATTCACAATTGGTTAAATAACAAAACATAATATCGTTAATCCAACGGCTCACATTGAATCTCCAAAACAACGCAATAATCGGATTT CGTCGCCTCAAAAACCACCATTTCCCTTTCTCCGCGTTCTCATATTTCCGCTTTTCCTTCTCTCTCTAGAATCAACCAGATCTCGTTCTCTCTTTCTATC TCTAACACTTCAACAATGGCGGCCGCATCTTCCCCTCGCGAAGAGTACGTGTACCTGGCGAAGCTCTCGGAGCAAGCCGAGCGCTACGAAGAGATGGTGG AGTTCATGGAGAAGGTCTCCGCCGCCGCCGATAACGAGGAACTCACCGTGGAGGAGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_186085; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_299154
| Blastp | F-box protein At1g78280 from Arabidopsis with 45.05% of identity |
|---|---|
| Blastx | F-box protein At1g78280 from Arabidopsis with 45.57% of identity |
| Eggnog | jumonji domain containing 6(ENOG410XQCR) |
| Kegg | Link to kegg annotations (AT1G78280) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415322.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |