Id Trinity | TRINITY_DN51586_c1_g1_i8 |
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Name Transcript | Ll_transcript_299156 |
Sequence | AATAATTATAAAAAAATGAGAAGAAAAGTAAGAGCACTTGAACAAAAAAATAACGAAAGTGAGAAGTGGAAAAAGGGGAAGAAGGAGAGGGTAGCGTAGG AATAACGAAAAACCGTGCACACGGTAAGGACTTTTCAAAATACGCGATTCAGAACCGAATGAGCATAAATCAAAGTAGAAAACAAGGTCCCTCATTTCTG TTTCTGTTTCTGAAATTGAAATTGACTTGAATTTCGCAATTGATGGAAATTTCTGTGAGTGAAGCTATTCGAGATCGCAGAATAGGTGGTCTTGGAAATC TTCGAGTCCTTCCCGATGAAATCCTTTGCGCAATTTTGGAGCTACTTACTCCCCGAGACGCTGCTCGCGTCGCTTGCGTCAGCAGTGTGATGTACATTAT GTGCAATGAAGAACCACTGTGGATGAGTTTGTGTCTTAAAGGAGTGTCTGGTTTGCTTCAATACAAAGGCTCTTGGAAGAAAACTGCCCTGCATATTGAG AATCTGCCGGACAAATATAAAGAGCATGATCGACGACCTTTACATTTTGATGGGTTCAGCTCTCTATTTCTGTACAGGAGGTTATACCGGTGTCATACCA CATTGGATGCGTTTCACGCAGATAATGGAAGTGTGGAAAGAATAAAAGACATCTCTTTGAAGGACTTCTACGACACATATGATGCAAAGAAACCGGTTAT GCTTACTGGATTGGCTGATACATGGCCTGCCAGGCATAAATGGACAACTGAACAGCTATTGCTAAACTATGGAGATGTAGCATTTAAAATTTCTCAAAGG AGTGCTCGGAAAGTCTCCATGAAGCTCAATGATTATGTCTCATACACTGAAGTTCAGCATGATGAAGACCCCTTATATATTTTTGATGAAAAGTTTGGCG AAGTTGCACCTAGCTTATTGAAGGATTATTGTGTGCCTCATATTTTTCAAGAAGACTACTTTGATTTATTAGATATAGATAAACGACCATCCTATAGGTG GCTCATAATTGGACCACAGAGATCTGGTGCCTCGTGGCATGTTGATCCTGCTCTTACCAGTGCATGGAATACTCTTCTTTCTGGCCGTAAAAGGTGGGCA TTATATCCTCCAGGAAAGGTGCCTCTGGGTGTGACGGTGCATGTTAATGAAGACGATGGCGATGTCAATATTGATACTCCATCATCACTGCAGTGGTGGC TAGACTTTTATCCTCTTCTTGCTGATGAAGACAAGCCAATTGAATGCACACAACTACCTGGAGAGACAATTTATGTACCAAGTGGATGGTGGCACTGTGT TCTGAATTTGGACACAACAATCGCTGTCACACAGAATTTTGTGAATTCCAATAACTTCGAATTTGTATGTTTGGATATGGCTCCTGGTTATCGTCACAAA GGAGTCTGCCGTGCTGGACTGCTTGCACTTGATGAAAATAGTTATGAAAATGTCAGACAGAACATGTCATATAATGGACAAAACTTAGGTTACACTGATT TGTCAAGGAAAGAGAAAAGAGCCAAAACTCACAAAGATGTAGATGATGTTATTAACGAAATAACCATGCATGATGCAACTAGAAGCTATAATTTATGGAA AGATGGGTTTTCCTATGATATAAATTTCTTATCCTTGTTTTTGGATAAAGATAGAGACCACTACAGTTCCCTATGGAGCTCAGGGAACAGCATTGGTCAA CGAGAACTTAGAGAATGGTTATCCAAACTTTGGATTCAAAAACCAAAAATGAGAGAGCTAATATGGAAGGGAGCATGCATTTCACTAAACGCTGACAAGT GGTTAGAATGCCTATTGAAAATTTGTGCCTTCCACAATTTGCCCCCTCCCACTGACGATGAAAGGCTTCCTGTTGGTTCGGGTAGCAATCCTGTTTATCT AGTGGGAAACTCTGTTATAAAGATTTTTGCTGAAGAAGGACTGGAAGCTTCACTTTATGGCTTTGGCGCAGAGCTAGAGTTCTACAGTCTACTGCATGAA GTCAATTCTCCAATCAGGAAACACATTCCTAATGTTTTGGCGAGTGGGATTGTTTATCTTGAAGATGGGTCTTATACTAATATCACATGGGATGGAAAAG GCATCCCTGGTGTCATTGCGAAGAGCAATCTTATCATAAATAAGTGTGATGTTGATGGTTTCTCATTTGGGGTATGGAGAAAGAAGCTGTTGGAGTATAG GAATGCTGGAAAGTCAATGGATGGATCAGTTAGTTCAGATACTCACGCAAGCATATGGCCTTATATGATAACAAAACGATGTGAAGGGAAAATGTTTGCG GAGTTAAGAGACAGACTATCATGGGAAGATGCAAAAAACTTGGCCTCTTTCTTGGGGGAGCAATTGGGCTACCTTCATCTTTTGCCACATCCACCATTGA ACATTTTATCTTTCTCTGATATTGAAGATGAATTAATCTTGCCTGATACTAATGGTTCTACTGCAACTGTTCTTTATAAATCAAACACTGAGGCAGAGTG GGGGGTCCTCACCAGAACCTTAGCAAGAAAGAGGAAGGATGTCTCAAGCCGTCTGACCAAGTGGGGAGATCCAATCCCTAGCAAACTGATAGAGAAAATT GATGAATATATCCCACCTGATTTCAGCAAGCTACTAAATATAACCGAGAATTTCTCGAGTGCTTGTAAACCTTGCTCCTGGATACACTCTGACATTATGG ATGATAACATTTACATGGAACCATCATCGGTTTCTACCTCAAGTGAGAATACAGAAAATGTCACCCTTGTAGAGAATGGTTTTCCAGGTAGCATTGATGA GGTGAAATCCTGGCGTCCTAGCTACATCCTTGATTTCAGTAATCTTTCGATAGGTGATCCTATTTATGACTTGATACCAATTTACTTAGATGTGTTTAGA GGTGATTCAGATCTCCTTCAGCGATTTTTAGAGAGCTACAAACTTCCTTTTGCAAATAACATATCAAAGCTTGATGAATCAGTAGAGGGTGGCCAAAAGT TTGCTCGTCTTTCATATGTTGCCATGTGCTATTGTATTTTGCATGATGACAATGTCTTGGGAGCAATTTTTAGTATATGGGAAGAATTGAGATCAGCAAA GTCATGGGAAGAAGTTGAGGTGAGAGTGTGGGGGGAGTTGAACAATTACAAAGGCTTTGCTTAACCATTGGCTGCATCTCAATATTTTTGGAGCCTGAAC GCACAATCAGAGCCCTTTGGACATTGCAAATACGGAACTGCCTCCAACGCACCCAATTAGGCTGGGTCTTGCTCTGAATTTCTCTGTGTTTTACTATGAA ATTCTTAACTCTCCTGATCGTGCTTGCAGCCTTGCAAAACAGGCTTTTGATGAAGCAATTGCTGAATTGGATACACTGGGAGAGGAGTCATACAAGGATA GCACTTTGATCATGCAACTTCTCCGTGATAACCTCACCCTGTGGACCTCTGACATTCAGGATGATGGAGTAGATGAAATTAAGGAAGCAGCACCTAAACC AGATGAACAGCAGTAAATATATGTTACTGCTTATTAGAAATGAACTTCTCCCCCGTATGTTTTTAAAGGTTGAAGGTGCTTGTTTCTAATCTCGTTGGGT ACTGAGATATTAGGTCATTCATTAGTTTGTCCTTTCTTATTTAAGTGTTTCCAATTTGCCTTTTTTCTTGAGGACACTCAAATTTTATTATATGGAATTG TAATTTTATGATTCTCCTCTCTCAAGTGAACCTGGTTTTGCTGAATTTTAGTGAGCCAAGATGCTTGTCTTATTCGCATTCTTTCTGAAAACACAAAATC CTTATTTAACCTGATTCGAATTTTGTTCTGTCTGAGGATACCTTTGAATTTTGAAGGTCTGGTCCCTTAGTTCTAGTAATGTGTATATGCCCCTCATGGT CACCCCACTAATGTCGTTCTGGTTTTAGAATCTCTATCTTATGTGGCTCACCTTCACCCCTCTTAATGATTTCTATTGTGTGTATGGAAAAAATTAGATT AATGGGTCCTAAAGTGCATCAGAGTCGGGGCATTTCTATTTCTTTAATTGCTTTAAAATGGTTTTTGTTGATTTCTTCATCAAAATTAGGGTAAACGATG CATCCCGTTTTCCACGTGACTAAAACCTGTCCTGTTTAAAATTTCAAATCACTCGTAAACATTGAAAACGCTGAAAAGTACGTAGAGGAGC BLAST |
Tissue | pods |
Gene name | LI_gene_186085; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_299156
Blastp | F-box protein At1g78280 from Arabidopsis with 59.67% of identity |
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Blastx | F-box protein At1g78280 from Arabidopsis with 59.18% of identity |
Eggnog | jumonji domain containing 6(ENOG410XQCR) |
Kegg | Link to kegg annotations (AT1G78280) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019415322.1) |
Pfam | F-box-like (PF12937.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |