| Id Trinity | TRINITY_DN51597_c4_g3_i16 |
|---|---|
| Name Transcript | Ll_transcript_299760 |
| Sequence | CCTCACTTCATTTACCTGCTGTCTGTCGTTTTTGTTGTTTCAAAAAACAAACACAAAACTCTTCTCTCTCCTTCTCTCACTTTCTCTCTCTCTCTTCACT GTTTTTGTTGCTTCGCTTTGTTCATCAACCAAATCTACACCAACTCTTTTCATTCTTCTTCCATTTCAACGAATATCATCTTCTTCTTCTTTCCCTAAAC TTCAATCCTTTTTTTGAATCTCTCTCTCTCTCTCTCTATATATATATATATATATATTCCACTCATTTGATTGCATCTGCTAAAGGTTCTTCCTTTTTTC CCCTCATTTGTTTTCACACATACTTGGATACTCTCAATCATAGTATCATCAATCTTCACGACAAGGGGTTCATCTTTCAATTCTAAAAATCTTTCCTTTA AAAGGTTGTTCCCTTCAACTCCTATGGCGGAAGAACCATCCTGGATCTGCCACTATGACAATGCCGCACCGAGGGAAACTGAGGAGTTTGATTCAATTTC AGATCTCGGTGAAGAAGATGACGAAGAAGCAACTGCTATTTCTGTAGATGTAAATTTACCCGATGACTTGTTGGAACTCATCCTAGCTTGTCTTCCCATC GCAAGCATTTTCAGAGCCGGTTGTGTGTGTAAAAGATGGCACAGAATTGTTACTTCCAAGAGTTTTTTATGGAACATTTCACATGTTCCGCCACAGAAGC CTTGGTATTTTATGTTTACTAGCTCTGATGAACCGATTGGTTATGCTTATGACCCCATCCTTCGGAAATGGTATGGCGTAGAACTTCCATTCATTGGCAC TTCTAATTGGTTCATTGCTTCATCCTGTGGCATGGTTTGCTTCATGGACAATGACAGCATAAGCAACTTATGTGTGTGCAACCCTATTACCAAAACCTGC AGGAAGCTCAAGGTGCCACCGGGTTTGAATTTTCCTGACTATACTGCATTAGCAATGTCGGTTAACAGGGAATCTCAGAGTTACACTGTTTCGATTGTGA ATTCGAAACAAATCCCTGAGAACTTTGTCGAGTGGGATATCTCGATTCATATATATGACTCTGAGCAAGTAAAGTGGAGGACATCTATAACCGAAGTTTT GTCGGGTTGGAGAAGCGGCGATGAGAGTGTGATATGTAACGGGGTGTTATACTTTTTAGTTTACGCAACCGGGGGTATTCAAACAGAAAATCGCCATGCT CTAATTGCATACAACCTGTCAAACGGTTCTTCTCAAATCCGCTTGGCAAGGAGCTTTATCCAGGTACCGTGTTCTCTAACATGTGGCCGTCTGATGGATA TGAAGGGGAAGCTTGTAATGGTGGGAGGAATCGGTAAACCGGATCGAAGTGACATAATCAAAGGGATAGGAATCTGGATTCTAAATGATAGAAAGTGGGA AGAGATTGGTCGAATGCCGCACAAATTCTTCCAGGGGTTTGGAGAATTAGATGATGTTTTTTCGAGCCGTGGAGCGGAGGATATGATTTATATTCAGAGT TATGGATCTCTGGCACTTCTGATTTTTGACATGAATAATAGACATTGGAAGTGGGCACAGAAGTGCCCGGTATCGAAAAGGTTCCCGTTGCAGCTTTTCT CCGGATTTTGCTTCGAGCCTCGGCTTGAAATGAGCCCATGGTTCTCTCAATACGAAATTACCAACACCTATTGAGACTTGTTTGGTAAGTTATTTATCGG TATTTCAATTTCATACAAAAGGTACTTGCCTATAAAACTTTTCATTCATGGATTCTGGTTTCTTTGTTTCTTTGTTACTAATAGAATTTCAAAATACTTC ATCTATATCTCCATGGCTTTATATTCCAGGTTATGAATAGACTAAGGGTGTGTTTGGAACAGTTTACAAAGAGCTTATTTGAGCTTAGTGTTTTAAATTG CGGTTGCGGTCGCGATTGCGATAACGGTTGCAGTTACTGTAATTGCGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_186200; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_299760
| Blastp | F-box/kelch-repeat protein At3g61590 from Arabidopsis with 58.61% of identity |
|---|---|
| Blastx | F-box/kelch-repeat protein At3g61590 from Arabidopsis with 58.61% of identity |
| Eggnog | F-box Kelch-repeat protein(ENOG410XPZA) |
| Kegg | Link to kegg annotations (AT3G61590) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432872.1) |
| Pfam | F-box domain (PF00646.32) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |