| Id Trinity | TRINITY_DN51598_c1_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_298100 |
| Sequence | GTCTCACTTTCTCTCTCTATCAAACATTCATCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAGAAACAGTAGAAGTAGGTGAAAAGCAAAGAACCCTT GTCTTCTGATTATTATTATTTTCACATTCACTTTCATCTTTTCTCTTCCATCCAATCCAATCGGTAACTGCATCAAAATCGCTCAGAAAGTGACACAATT TTTTCAAAAATAGGAAAACCCAGAATAGAAGGACTTGCCCTTGTTGTGTTTTGTTTGAGGATAGAATCAAGTTCGGATTTTGATTCACCCCGTTCAACCC CAAGTGTTTAAAGTTTGTTGCTTTTGTGGGTCAGATCTTAGGGATTCATTCTTGTCTTTGAAGCTCTTATTAGTGTGTGGATCTCTCTCATGGTTTGAGT CAATGGAGAAATGGGATTGATTTTGTGGGGTTTGAAATGTGAGTGAGTTTTGTTCAATTTTAGTTTTTTTTTGCGTGTTTTGATTTAAAGTAAGTGAGAG TGGCAAATGGCAATGGTGGCTCTTTAGTCTTCAGTGATAAGCTCCGTGTGTGGAAAATGTCAGCTTCTATAGCAGCTTTCGAGCGACCTCGACCCGGGGC TTCTAATACGGTTTTCAAAAGTGGTCCACTTTTCATATCATCTAAAGGGATAGGATGGAAGTCTTGGAAAAAGCGGTGGTTTATACTGACACGCACATCG TTGGTTTTTTTCAAAAATGACCCTAGTGCCCTTCCACAGAGAGGTGGTGAAGTAAACCTGACATTGGGTGGTATTGACTTAAATAATTCAGGGAGGTATG CATTGTGAATTGATTTCTCTTTTTAGTTTAAATTTTGATGATCTGTTTTAAAATTGTATTCTCCTTTCCAGCGTTGTTGTTAGAGAAGACAAAAAACTGC TTACGGTATTATTCCCGGATGGACGTGATGGGCGTGCATTTACTCTTAAGGCTGAGACATCAGAAGACTTGTTCGAATGGAAGACATCTCTGGAACAAGC CCTTACACAAGCACCAAGTGCTGCCCTTGTTATGGGACATAATGGGATTTTTCGGAATGACACAAGTGATTCTATTGAAGGGTCTTTCCATCAATGGAGG GACAAACGTCCAGTTAAGTCTTTGGTTGTTGGAAGACCAATTCTATTAGCACTGGAAGACATTGATGGTGGTCCATCTTTCCTTGAAAAAGCTCTTCGGT TTCTAGAAAAATATGGGACTAAAGTTGAAGGAATTCTGCGGCAGTCTGCAGATGTTGAGGAAGTAGATCGGAGAGTTCAAGAATACGAGCAAGGGAAGTC TGAATTTCCTTCTGGCGAGGATGCCCATGTTGTTGGTGACTGTGTCAAGCATGTTCTCAGGGAGCTTCCCTCATCTCCAGTTCCAGCTTCTTGCTGTACT GCTTTGCTGGAGGCTTACAAAATTGATCGCAAGGAAGCTAGACTTAATGCAATGCGCTGTGCTATAGCAGAGACCTTTCCAGAGCCAAACCGACGTTTGT TACAGAGAATTCTGAAGATGATGCACACAATTGCTTCTCATTCTCATGAGAATCGGATGACTCCATCTGCTGTTGCTGCTTGCATGGCACCCTTGCTCTT ACGGCCTCTACTAGCAGGAGAATGTGAACTGGAGGATGAATTTGATGTTGGTGGTGATAATTCAGCTCAGCTTCTTGCTGCTGCTAATGCTGCTAATAAT GCTCAAGCAATTATTACTAATTTGTTGGAGGAGTATGAGAATATATTCGATGAAGAAAATATACAGAGATGTTCCATGTCAGCAGATTCACGGGTTGAAA ACAGCGGAACTGAAGATTCGACTGATGATGATAATATAGACGTGAAAGAAAATGGTGCTCACGATGCAGAGAATGATGTTGGTCCAGAGACAGATGATGA TGCTGAACGTGTACACAGTGGAAAATTGAGTGAAAGTAGTGGTTATGCGGGAAGCGATCTTTATGATTACAAGGCATTTGGAGGCGATGATTCTGATATT GGATCCTCTACTGGTATCCACATGAAGACTGAAAATAAAAATCGAAATGCTGATCCGGTTACCCCATCGCCTGTGGACCAAAACAAACAAAGAAATGGTA ATGAGAACTCAGTTAATGAGAAGGATACTCCAAATTTGTTCCCTTCCACTGAATCCTATCGTTCTATGGGTGAGATTTTATCTTCTATGGACTCTGGAAA CCATTTACCCGTGCTTGGGATTGAATCAGGTTCTGCAAAGCAAACTGTTAAAGCTAGTAGCAGTAGTTTCAGTTCTAAACGGTCAACATTCTGGGGAAGG AGCAATCCGAGGAAGACACCGTCAGTGGAATCTGTTGATTCTTCTGGAGAAGAGGAGCTTTCTATCCAGAGGCTAGAGATTGCAAAAAATGATTTGCAAC ACAGAATTGCGAAGGAGGCTAGAGGCAATGCAATTTTACAAGCAAGCTTAGAGAGACGGAAGCAAGCTTTGCATGAGCGGCGTTTGGCGCTTGAACAAGA TGTTTCAAGATTGCAAGAACAGTTGCAATCTGAGAGGGATCTTCGAGCTGCACTGGAAGTTGGTTTGAGCATGTCTTCGGGACAGTTTTCCAGTTCGCGT GGCATGGATTCTAAGACAAAGGCTGAGCTGGAGGAGATTGCACTTGCTGAAGCTGATGTGGCCAGATTGAAGCAGAAAGTTGCGGAACTTCACCATCAAC TTAATCAGCAACGACAACATCACTTTGGTTCACTTGCTGACGTGGGTGATCGATACCAACAGACCCAAAATCACCCTCAGCAAAGATTTCTTCAGCAAGA TTTTGATTCAACGCTTGCCTTCGTCAATCATGAAAGGAAACAAAGGACTGAGGAGAGTTTGTTGAGCACAGATTGGAGAAATATCAAAGGACAAGTATTG GCAGGCAGTAACGGGAGTAGGCAGCCTTCTCGGAAGCAATTCATGGACTCCAGTCCCAGTGATTCAAAAAGCACCGAGGCATCAACAAACATATCCGTTG ATGAGCTTGGTGCTGTTGATTCTGGCTCAGTTCCCTCCACCTCAAGGGCAGCAGAGGTGATAGAGTATGGAAGACATCCATCTGTAGCATCTTCAACATT AGTAGAGTTAACTACCCGTCTCGATTTTTTCAAGGAAAGGCGTTCGCAGTTGATGGAACAGCTCCATAACCTTGATTTGAATTATGGTTCTACAACTTGG CAAGATTCCGTCTATAAACCGTCGTCGCCGTCATGGAGTTGAGATCTTGGTCAAATTTGTGCTGCTTTATAAAATCCATGCTCAATAATTTTGGCTCACA TGTTGTATATCCTGACTCATTGCATATATTTGTTGTGTCCTTTGTGGTCTATGTACTGCTTTATTTATATATAAAAATACAACTTTGGTAGTGAAAGTTC ATTTGAGTTGAATTAAGTAGCTTCTCCCTTTGTTGTGCATCAACTTTTTCTCTTTTTAATCTTTCAGAATTGAATTTCTTTGTTTCTTTGTTATGTTATT TGTTATGGAGTTTGGTGTAATTATATTATTTGTTATGTTAGTAGCTTGGGAAATTTTGTTGTTGAACAAAGCTATTATGAGGAAATTTTATTTCCTTTTT AGCAAATTCTTTGTACATATGTGTGAAAAATCAATGTTATGTTGTTACTGTGTATCAAAATTATGTTCAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_186206; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_298100
| Blastp | Rho GTPase-activating protein 7 from Arabidopsis with 68.36% of identity |
|---|---|
| Blastx | Rho GTPase-activating protein 7 from Arabidopsis with 68.99% of identity |
| Eggnog | rho GTPase activating protein(ENOG410XR4E) |
| Kegg | Link to kegg annotations (AT5G19390) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461528.1) |
| Pfam | RhoGAP domain (PF00620.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |