| Id Trinity | TRINITY_DN51598_c1_g1_i21 |
|---|---|
| Name Transcript | Ll_transcript_298110 |
| Sequence | GAGAGAGAGAGAGAGAGAGAGAGTAGAAACAGTAGAAGTAGGTGAAAAGCAAAGAACCTTTCTCTTCTCATTATTTTTTTACATTTACAACCCCAACAAT CCTCAAACCACTCTTCTATTTTCTAATCAAATCGGAAACTACGAGAAAAATCACTCTGAAAGTGACAAATTTTCAAAAAATAGGAAAACCCAGCTTGCAT TTCTTGTGTTTTATGTGAGGATAGAATCAAGTTTGGATTTTGGTTCACCCCATCAAACCCCAAGTGTTGAAAGTTTCTGGCTTTTTGAGGGTCAGATCTT AGGGATTCAGTGTTGTATTTGAAGCTCTCTCACTTTGTGGATCTCTCTGATGGGTTGACTCAATGGAGAAATGGGATTGATTTTGTGGGGTTACATTTGC TGATAATTTATGTTCAATTTTAGTGATTTTTGGGTTTTGAAGTAAAAGTGTGAGTGGCAAATGGTAATGGTGGTTCTTCATTGATAAGCTCTCTGTGTGT GAGAAATGTCTGCTTCTTTAGCAGCTTTCGAACGACCTCGACCCGGGGCTTCTAATACAGTTTTCAAAAGTGGCCCACTTTTCATATCATCTAAAGGAAT AGGCTGGAAGTCTTGGAAAAAGCGATGGTTTATACTCACACGCACCTCATTGGTTTTTTTCAAAAACGACCCTAGTGCCCTTCCACAGAGAGGTGGTGAA GTAAACCTGACACTCGGTGGTATCGACTTGAACAATTCGGGGAGCGTTGTTGTTAGAGAAGACAAGAAGTTGCTGACAGTATTATTCCCAGATGGACGTG ATGGTCGTGCATTCACCCTTAAGGCTGAGACATCAGACGACTTGTTTGAATGGAAGACAGCTCTTGAACAAGCTCTCGCACAAGCACCAAGTGCTGCGCT TGTTATGGGACACAATGGGATTTTTCGTAACGACACAAGTGATTCCATTGAAGGGTCTTTCCAACAATGTTTGTACTCATTATTCATTACATCTAAGTTT ATCAACTTATATTAGTTGTCTGTCAATATTTGTATTGGTTTTGTTATTTTGGGTGTGTCTCCGAAAGCCTTTGAAGATTTGTCCTTCCCAAATAAAATAA AATTTAATTTCTTAGTTTGTCGATATTTTTTATATAAAAAGAATTTGTCATTGTCACATTCTGTATTGTGCTTCCAGGGAGAGACAAACGTCTAGTTAAG TCTTTGGTTGTTGGAAGACCGATTCTACTAGCACTAGAAGATATTGATGGAGGTCCGTCTTTCCTTGAAAAAGCTCTTCGGTTTCTAGAGAAGAATGGGA CTAAAGTTGAAGGAATTCTGCGGCAGTCTGCAGATGTCGAGGAAGTAGACCGGAGAGTCCAAGAATATGAACAAGGCAAGACCGAATTTGCTTCGGATGA GGATGCCCATGTTGTTGGTGACTGTATTAAGCATGTTCTAAGGGAGCTGCCTTCATCTCCAGTTCCAGCTTCATGTTGTACTGCTCTGTTGGAGGCTTAT AAAATTGATCGCAAGGAAGCTAGGCTTAATGCAATGCGCTGCGCTATAGTGGAGACCTTTCCAGAACCAAATCGACGTTTATTACAGAGAATTCTGAAGA TGATGCACACAATTGCTTCTCATTCTCATGAGAATCGGATGACTCCATCTGCTGTTTCTGCCTGTATGGCACCCTTGCTTTTACGGCCTCTGCTTGCTGG AGAATGTGAACTGGAGGATGAATTTGATGTCAGTGGCGATAGTTCAGCTCAGCTTCTTGCTGCTGCTAATGCCGCAAATAATGCTCAAGCAATTATCGCT ACTTTGTTGGAAGAGTATGAGAATATATTTGATGAAGAAAATATACAGAGATGTTCCATGTCAGCGGATTCGCGGGTTGAAAACAGCGGGACTGAAGATT CAACTGATGATGATAATATCGATCTGAAAGAAAATGGTTATCATGATGCAGAGAATGAAGTTGATCAAGAGACAGATGATGATGCTGAACGTGTACACAG TGGAAAATTGAGTGAAAGCAGTGGGTATGCTGGAAGCGATCTTTATGATTACAAGGCATGTGGAGGCGATGATTCTGATGTTGGATCTTCTACTGGTAAC CATGCTAAAACTGGAAATAGAAATCTAAATGTTGATCCAAGTACCCCTCTGTCCGAGGAGCGAAACAAACAAACAAAGGGTAATGAGAACTCAGTTGATG AGAAGGATACTCCAAATTTGTTGCCTTCTACTGAATCCTATCGTTCTATGGGTGAGATTTTATCTTCAATGGACCCTGGAAACAATTTACCAGTGCTTGG AATTGAATCAGGTTATGCGAAGCAAACTGGTAAAGCTAACAGCAATATTTTCAGTTCTAAACGGTCAACATTCTGGGGAAGGAGCAACATAAGGAAGACA CCATCAGTGGAATCAGTTGATTCTTCGGGAGAAGAGGAGCTTGCTATTCAGAGGCTAGAGATTGCGAAAAACGATTTGCAACACAGAATTGCAAAGGAGG CTAGAGGCAATGCAATTTTACAAGCAAGCTTAGAGAGAAGGAAGCAAGCTTTGCATGAACGGCGTTTGGCGCTTGAACAAGATGTTTCAAGATTGCAAGA ACAATTGCAAGCCGAGAGAGATCTTAGAGCTGCATTGGAAGTTGGTTTGAGCATGTCTTCAGGACAGTTTTCCGGTTCGCATGGCATGGATTCCAAGACA AAGTTTGAGCTGGAGGAAATTGCACTTGCCGAAGCCGATGTGGCCAGGTTGAAGCAGAAAGTTGCGGAACTCCACCAACAACTAAACCAGCAACGACAAC ATCACTATGGTTCACTTACTGATGTGGGTGATCGATACCAACATAACCAAAATCACCCTCAGCAGAAATTTCTTCAGCAAGATTTTGATTCAACTCTTGC TTTTGTTAACCATGAAAGGAAACAAAGGACCGAGGAGAGTCTGTTGAGCACAGATTGGAGAAATATCAAAGGACAAGTATTAGGAGCTGGTAATGGTAGT AGGCAGCTTTCTCGGAAGCAGTTTATGGACTCAAGTCCTAGTGACTCAAAAAGTACTGAGGCATCGACGAGCATGTCTGGTAATGAGCTCGGTGCTGGTG ATTCTGGCTCAGTGCCCTCCACCTCACGGACGGCAGAGGTGACAGAATATGGAAGACATCCATCAGTAGCATCTTCGACTTTAGTAGAGTTAACTACCCG TCTTGATTTTTTCAAGGAAAGGCGTTCGCAGTTGATGGAACAGCTCCATAACCTTGATTTGAACTATGGTTCTACAACTTCGCAAGACTTCGGCTATAAA CCATCATCACCATCATGGAGTTGACGTCTTGGCCAAATCGGCGCTGCTACATAAAATCCATGGTGAAGAATTTTGGCTGATATGTTGTATATCCTTTGAC TCATTGCACATAATGATCCATGTACTGTTTTTATTTAAATTTGTTTGTTTTTTCTTGTCTCTTTTGGTAGTGAAAGTTCATTGGAGTTGAATTAAGAAGC TTACCTTATTTGCATCAGCTTTTAACTTTTTATTATGTCTGAATTGGATTCCTGTGTCTTTGGGGGGTTGGAGTTTGGTGTAATTATATATGTCACTGGA TATTTGTTGAACAAAACAAATATAACGATGAAATTTTATTTCCGTTTTGGTAAATTCTTTACTTAATGTTATGTTGTTACTTAATATCTAGGACATTATT TATGATGCTGAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_186206; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_298110
| Blastp | Rho GTPase-activating protein 7 from Arabidopsis with 64.38% of identity |
|---|---|
| Blastx | Rho GTPase-activating protein 7 from Arabidopsis with 67.21% of identity |
| Eggnog | rho GTPase activating protein(ENOG410XR4E) |
| Kegg | Link to kegg annotations (AT5G19390) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456124.1) |
| Pfam | RhoGAP domain (PF00620.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |