| Id Trinity | TRINITY_DN51598_c1_g6_i4 |
|---|---|
| Name Transcript | Ll_transcript_298114 |
| Sequence | GAAAATCATAAAATAGTACCAGTTACAAAGAAAGCCTAGCCATATATTTGTGGAACCGACCCAATTATGTGATTGATTAGATTAGATTTGGAAGAAAGAA GTGACGTGAAACTAACAAAAAAACAAATAAAAAGACAGTAACATATGTTTAGTCGTAAAAGGAACAAAAACCTTGGCTGCTGCTATTTTATGTGGTGAGA AATTGAATTGATGTTTGTGGATGATGTCTTCTACCAGCACCTCTTTCGCTTCCAACGTGCCTCAATCCACGTTTCTAGAGTTACCACTTACTACCAACAA CCGCTTCTCCCTCCGCTTCTCCGCCAAGTCCCACCACCGTGTCTCCGCCTTCTCCGATCAACGCCCTGAGGGACCCTACTGCGTCTACGTTGGACCCCTT GAAACTGCTAACCAAGAAACCCTTGAAGCTCTTTATTCTCAAGCTAGAGATGCTTATTATAGTGGTGAGCCTTTGATTGTGGATGACATGTTTGATAGAG TGGAGTTGAAGCTAAGAAGGTTTGGTTCAAAGTCAGTTGTCAAGTACCCTCGATGCAGTATCCGGAGGCAATCAACATTTGCTGATGCTGAGGTAATTTT ATGTAGAATTTGATATTAAACTATCATTGTTAACTGCCTGTGATCCCAAATTCATGCCAATTTGCTGATTTTGGTCATTGACTTTCCAAGTTGTGGTTGC ATGATGCGCTTAATGATTTTAACAATGTGTCGCATAGAGTAGCGATTCCCACTTCTTGGATCTTGATATGCTGAGAAAGTTAGGCTTGTACATGATCGGG TGGATTTCTATTTTATGTCATGTAGTTGCTAACTTGCTACATATTTACTGGTATATCAACATATTTAGTGACATCCCCTGCTCCTTTCTTTTTTCTTTGT TTCTTCACTGGAATATTGAGTGCTATGGTTGTAGGGCAGGAAGATCTATCTATGGTTTTGGCATTAGCAAGCGCATGGGCAATGTTCCTTGCATTTGGAA GTTTAGCATGTGTCGGACCCATATCATACACTGTTGGTGCGGCTTATCAAAATGCATTCAATTCAGGATTACCACACGGTAGCCAATTATCTGGACTAGG ATTTCTGGCGTTGATGAACAACATCTTCATTGGGTTGGGTTTTGTGATCGGGTACCCAGTTGCTTCAGCTTCAGTTAAGGTGCTTCAAGGCCTGTGGACG AATGACCTGGTGGCACTAAAAGGCGCATGTCCAAATTGTGGAGAAGAGGTATTTGCATTTGTGCGAAGGGACAAAAACGATGACTTGCCTCATAGAGCAA ATTGTCATGTTTGTGAATGCTTGTTAGAATTTCGCACCAAAGTGGAGGTAATAATTTTAGATTGTTTTTAACTTCTTGCAAAAGGCAATTCATAAAAGTA TAGACCGTTATTAACTCTCAGTTTATTAGAGAGAATTGAAAATGGTCATGCCAAAAGTTTGCAATGCTACCCTGCAAAAGAAAAAAAAGGTACCCACGAA AAGATGATGCTGGATTTCTCATGCATGTGTTCTTGTTTTTGCAGCCATCAGTATCAACATTAGGTAGACAATGGGTTTATGGGCGTATTTACCTTGTTTC TCTAAAAGGCAGACGCCAAAGACAATTGTGAAATTTCTTCTAAGCATTTTGACTCAATTCCATATAATTGTGTACAGTAAGGATCATAGTACCATCAATT TCTTTCATAATCTTGTTTTAGTCTGCAATGATTTTGCCCAATACCAACTTGTATACTTTTTGCAAAGGGAGAAGTCGACATTTTAATGGATGGACAACAA TTTTGTTTGATTTGACTGTGTTTTGTTCTGTGCAAGATTTTGGAAGTGATACTTGATATGCAAACCTGGTGGTATTTTCCTTTCATGTAAAGCAGGAACC CGGTTCCCGTGGATGCAATTTGATCTCTACTAATTTTATCGTGCAGAAAATCAAATATGAAAGATAATTTTTGTTCTGTTATGAGTGTGTGTGTAGATAT ATATTCCATAAGATGAGGATTTCCATATTCTTTGTACCAAAAATATTTCAACAGAATGGCAAACATACTTCAGTCTCAGCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_186211; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_298114
| Blastp | PGR5-like protein 1B, chloroplastic from Arabidopsis with 35.09% of identity |
|---|---|
| Blastx | - |
| Eggnog | PGR5-like protein 1A(ENOG4110C1Q) |
| Kegg | Link to kegg annotations (AT4G11960) |
| CantataDB | Link to cantataDB annotations (CNT0000168) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414058.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |