Id Trinity | TRINITY_DN51599_c4_g3_i1 |
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Name Transcript | Ll_transcript_300765 |
Sequence | CCTTACCTCACAATAGGACCCTTTCCTCTTTTTCCTCCATCTCTATCTTCTCAACTTCATTGGCTCCAGCTCTTGTGTCCCTTTCACTTACCCTTCACCT TTTTGGCACCCACTACCCACTCTCCCAAACCCACCCTTTCAAAATTTCCCACACCTCTCTAATCTCTTCTTCCCTTAGATCTCTACATTTTCTAGGTACA ACTTAATCCAATCATTACTCCTTAACACACTCTCAACTTAATGTACCATTCTCGAAATATCCGAGAGAAATGAAAGACTTCAGAGACATGAAAGTCGTGA TATAATAATTGCGGATCTCTCCGTTTTCTTTACTTTCCTTATAAAAACTAACTCGCAAACAAGTTCCGGAAGAGCACCACATTTTTAAATGGAGGTGCCT TCGGAGAAACTAGTTGAAGGAAAAACATTAGAGAACCCTAAAATCTCAGTGAAGAAGAACTCTCTAGAAGGTTCTGGAAGAACTGCGAAAACCGTAAGCA CTGAAGGTTCTGTTGGTACAAGAAAGAGAGTAGTGGAAACTCGAACCGGTTCAGTTACCGGTCAGGCTTCTGCTACGGCTGTTCCGAAAAGATCCGGTTC AGGTAGTGGTTCTGCCGTGTCGTCTTCGATTTCTGCGCCACGACGAAGCAGCACCGGTGGATTGTACCGGAAGCCGGCGCCGGTTTCCGAAGGAAGAAGG AAAACCGTCGCTGATTCTTCTGCCGGCGCCGGAGCTGGTGTTAAGAGCAATGAACCGACGCGGAGGTCTCTCCCGGAGCTCCGACGAAGTTCTCTGTCTT CTTCTTCTTCTCCGAGAAGCAGTATCGCCGGGGATCCAGTTGCGTCGGTGGGACCGAGTTCGAGGACGCGAGTTACATCAGGTACGAGTAACGTAGAGTC TGCAAAGAGGCCGTTGAGTAAGCCAGTATCATCCGAAGCTTCTATTTCGTCGCGAAGAGGTGCTTCTTCCACGGCGGATAGTAGTGGTGGCAGTTCTGTG AGGAGATCGGTTTCGAAGTTTTCGTCACCGCTATCGGCGGCGCGGTCGTCTTCGGTTTCCATTGGAATGAGGACTGGTTCTCTATCGTCATCATCACATG ATAAGAGTTCTGCTGTGTCTGGAAGGAGGAAGGTGGGGACTCCAGATAGCCGTGAGTCTCGTTTTGTTGTTCTTCCGCACGTTGACAACAAGGCCAGTGA TGATGTGAGATTGGATCTTAGGGGACACAGACTCCGCAGTCTCAATACTAGTGGATTAAACTTATCCTCAAACTTAGAGTTTGTTTATCTTCGAGACAAT CTCTTGTCTACTTTGGAAGGAGTAGAAGTATTGACAAGAGTGAAGGTTCTTGATTTGAGTTTTAATGATTTTAAAGGGCCTGGATTTGAGCCTCTTGAGA ACTGCAAAGTACTTCAGCAACTCTATCTTGCTGGAAATCAAATCACTTCATTGGCAAGTCTCCCACAGCTTCCTAATTTGGAGTTCCTCTCAGTAGCTCA AAATAAGTTGAAATCTCTGACCATGGCAAGTCAACCTCGACTACAGGTACTAGCTGCCAGCAAAAACCGAATATCCACCCTCAAGGGTTTCCCATATTTA CCTGTTCTTGAGCATTTCCGAGTTGAGGAGAACCCAATATTGAAGATGCCTCATCTGGAAGCAGCATCAATATTGCTAGTTGGGCCTACTTTGAAAAAAT ATAATGATAGAGATCTTTCTCCTGAGGAAATCACACTTGCAAAGCGTTATCCTACACATACAGCATTCTGCATCAGAGAAGGTTGGGAGTTTAGTCGCTC TGAGCATGCTGCAGATTCAACTTTCCGCTTTCTAGTTGAGAAATGGAAGGACTGTATTCCTCCTGGGTTTTTTCTCAAAGAAGCCTTCATAGATAAACCT TTAGAAGAAGATGTGTGTCACTGTCACTTCACAATTATTCATGATGGTGCAGCAACTGCTGACTCACCATTAGTTTTAAAATATCAATGGTTTTGTGGTG AGATGTCTCTTTCGAATTTTGTCCCTATTCCAGATGCTACTAGTGAGATTTACTGGCCAAAGCGTGAAGACATTGGAAAAATTCTGAAAGTCGAATGTAC TCCCACTTTAGGTGAAACAGAGTATCCTTCAATATTTGCCATATCTTCTCCAGTTTCACCAGGGAGTGGAATTCCAAAGGTTGTAAATCTTGAAGTGCAC GGGGAACTGGTGGAAGGAAGCATCATCAAGGGGTGTGCTAATATTGCATGGTGTGGTGGGACTCCTGGAAAAGGAGTTGCTAGTTGGCTGAGGAGAAAGT GGAATAGCAGTCCTGTGGCCATTGTTGGGGCAGAAGATGAGGAATATCAGCTTACCATAGATGATATTGATTCAAGTTTAGTTTTCATGTACACACCAGT AACAGAAGAAGGTGCCAAAGGAGAACCTCAATATAAATATACAGACTTTGTAAAAGCTGCTCCTCCTTCAGTCAGTAGTGTTAGAATAGTTGGAGATGCT GTTGAAGGAAGTATCATCAAAGGAGTGGGTGATTATTTTGGTGGAAGGGAGGGTCCCAGCAAATTTAAATGGTTAAGGGAGAACGGCAATGCCGGAGATT TTCTGTTGGTGTCAGCTGGTACATCTGAGTATACCTTGACCAAAGAGGATGTTGGTCGGCGTTTGGCATTTGAATACATACCTATTAATCTTGAAGGCCA GGAAGGAAAGTCGTTGTCTGTCATGTCTCCTGTTGTGAAACAAGCACCCCCAAAAGTAATCGATGTCAAAATAGTTGGGGATCTACGAGAGAATGGCAAG GTCACTGTGACTGGTATTGTTACTGGAGGAACTGAAGGATCTAGCAGAGTTCAGTGGTTTAAAACACGTTTGTCAACTTTGGATGAAAACAGTCTAGAAG CTTTAAGTACTTCCAAAATTGCTAAGGCATTTCGCATACCTCTTGGAGCTGTTGGCTTCTACATCGTTGCAAAATTTATACCGATGACTCCTGATGGTGA TTCTGGTGAACCAGCATTTGCAATATCTGATAGAGCAGTTGAGACTCTTCCGCCAAGCTTGAATTTCTTATCTATCATCGGAGATTACAGTGAAGATGGA ATATTGACTGCTTCATATGGATATGTTGGAGGCCATGAAGGAAATAGTATATATAATTGGTGTCTTCACGAGGTCGAAGGTGATGTTGGTTCTTTGATTC CAGGGGTTTCGGGAATTCTGCAATATCGTATTACTAAGGAAGCCATTGGAAAATTCATTTCATTCCAGTGTACTCCTGTACGTGATGATGGTGTTGTAGG TGACCTACGAATTTGCATGGGGCAAGAGCGTGTTCGTGCTGGAAGCCCAAGATTGCTTTCTTTACGCTTAACTGGAGATGCTGTAGAGGGAACAAACCTG AGCATTGAAAAGAAGTATTGGGGTGGTGAAGAGGGTGATTCAGTTTACCGCTGGTTTAGGACCAGGTCTGATGGCACACAAACTGAAATCATGGGAGCAA CCACTGCATCATATGTGCCCTCTATTGATGACATTGACTTCTTTATTTCTGTTTCATGTGAGCCAGTCCGAAGTGATTGGGCTCGTGGACCCATGGTTCT TTCTGAACAAATTGGACCTATAACACCTGGTCCGCCAACATGTCATTTTCTGGAATTTCATGGATCAATTATAGAAGGCCAATGCTTGAACTTTAATGTT GTATATAGTGGAGGGGAGAGAGGAGATTGCACACATGACTGGTTTAGAGTGAAAAATAATGACGTACGGGAGAAAATAAGTAGTGATGAGTTTTTGGATT TGACTCTTGAGGATGTTGGTGGGTGTATTGAACTAATCTATACTCCTGTGCGCAAAGATGGAACCAAAGGCATCCCAAAGAACATAGTTTCTAGTACAGT TTCCCCTGCGGATCCAAAGGGAATGGATCTCATAATTCCTGAGTGCTCGGAAGACGAAGAGCTCATCCCACTTAAAAAATATTTTGGTGGACATGAAGGA AGTGGAGAATATATATGGTTTCAGACAAAGGATAAGGTTGAAGGGCCTGCACTTCTAGATATATTTAATGCTTCTGATGTGGAAATATGCGGGACAGAGC TAACATATAAACCATCACTCAAAGATGTCGGCGCTTATTTGGCTTTGTATTGGGTGCCTACTCGTGTCGACAGAAAATGTGGGGAGCCATTAGTTGCAAT TTCCAGTACCCCAGTTTCTCCAGCTCCTCCAGTTGTTTCTAATGTCGATGTTAAAGAGTTGTCTTTGGGACTTTATAATGGAGAGGGTGAATATTTTGGT GGATATGAAGGAGAAAGCCTCTTTAGCTGGTACAGAGAAAATAATGGAGGAACCATTGAACTGATTAATGGGGCAAATTCAAAAACCTACAAAGTTTCTG ACTCAGACTACAGTTATCGTTTGTTGTTTGGATATACACCAGTTCGCTCAGATTCAGTTATAGGAGAACTCAGGTTATCTGATCCAACTGACATTGTTCT CCCAGAGCTTCCATATGTGGAGATGCTTGCTCTTACTGGAAAGGCAGTTGAAGGTGATGTGCTCACAGCTGTAGAAGTGATTCCAAATAGTGAGACTCAA CAACATGTTTGGAGCAAATACAAGAAAGATATAAAATACCAATGGTTCTGTTCATCTGTAGTGGGAGACAGTTTGTCATATGATCCAATACCCAATCAGA GTTCTTGCTCCTATAGAGTGCGGCTAGATGACATTGGTCGTCGTTTGAAATGTGAGTGTGTGGTAACTGATGTATTTGGAAGGTCTGCTGAAGTGGTGTA CATTGAGACGACTCCTGTATCGCCAGGGATTCCGAGAATACAAAAGTTGGAAATTGAGGGGGGAGGATTTCATACCAATCTTTATGCTGTCCGTGGCACT TATAGTGGTGGTAAGGAAGGAAAAAGTAAAATCCAGTGGCTTAGATCAATGGTTGGAAGTCCTGACCTGATCTCCATACCAGGAGAAACTGGCAAACTGT ATGAAGCAAATGTTGATGATGTTGGCTATAGGTTGGTGGCCATCTATACCCCTGTAAGAGAGGATGGAGTAGAAGGCCAACCAATTTCTGTATCGACGGA GCCAATTGTCGTTGGTAAGTTGAAATTCTTTATCTAATTGCCAACAGTTTGTCTACGTTTCATTCTTTTGACATTTTTGTTGTTGTCAATATGATTATTT GAGTTGGTGACTTGGTAATTTTGCCAATCAGATGGTACTATCCAGTAGATGGTTTTGTTAGCTTATATTTTTATGAGATTATGATTATGGATTCAGAGTG GTGGTTATGTCCTATGCAGTATGCATCTGTTTTTATATATAAATACTATGATAACCAACTAGTATCCTACTTGGTTTCATATTGGGCCAAGTGGCCTAAT TTTAATTTATTATTCCCGTACTATTATGGATTTTTAAGTAAGATAGTGAGGCAACTGAATTGAGGAAAAATTGAAAATCCCCTTGTAAAAAACTAGCATG CAAAACCAAGATTGGTTTCTTAGTTGTCAGCTATGCTGTGCTTATGGAAAGATTAACCTAAGATTAATTGTTTGAATTATAATAACATAAACGTATTTAA TTTAGATTATAACATAAGCAAGGGCAAAGAGAATAAACAAAAAAAATAAGAATGAAGCAAAATTAAATTTCAATGTTTACTTGAAAATTAGAAGATGCAA ATAACAAAGGAATCAAAACAATGTGTTTGCAGTTTGCCTTTGGTTATGGTGACAAATATTTTTTAATTCCTGTAGTCTATGTTGTGACACACCAGCCTTG ACATGCGACCCCTCTGGGCCCATGAATTCATTGAATGTGTCACCCTTTCAGCTTAAATACCACAACAGTATTTTATTCCACGTAAAGGGAGTCTCCCGCA ACTCAAACCCGTAACTTCATGGACTTATAGCCAAAGGTTCCATTTAGTCGCTACCACTAAGCTATGGTTGGGGTTTTACATGTGTTTGGACTTGGGATTT TAAAATCCCTTGATTTTGAAACAGAAGGAAAGCTTATCAAACCAGTCAAAGGTAGGGAGAATTGCAGTGAAGTGGGGAAAAGGTGTTGAGATTAGAGGTT GATGGTGGATTTTAAATTTCCACCTCCTAATTTGGTATTTAAATTCCTCATTCTGGGTAAAAGAATAGCCAAAAGAAAATTTGAAATTCTTTTACTAGAA GCTGATTGTGTAGAAAATTATGTTTAATACCCGGGTTGATTACATTCCTCTGTCCAAGCAAACACTCAGGGTAAAGCATTTTTTTATAACATTTGAAATT GAATAAATATAGCTGATCTTTAATTCCTTGCAGAGCCTGATGTTCTTAAAGAAGTGAAGCAGAACCTTGATCTTGGATCAGTCAAGTTTGAGGTGGGATA TATCTATATGTTTATTGTCATTACCACATTCTGAAAAATCTGTTGTTGATTATGTTTTAAATACCAGTCAGAAGGTATAACAACGAAATAAAAACTGTTA TATTTATTTGCATTGTTAGTTAGTAACTGTTATCTTTGAGATCCTAGTCCAACAAAGCTTGCATGTATTTATTAGAATCAATAAGGTATAGTTGTCAAAA ATGTCTGAGCATTAAACAAGAAAAAGAATGACAGTGACTTTAGTGTGGCCATGACTTTGGTTAAAGGATCCAACTACTAGCTTTGCTACCCTTTTGTTGC CATAATTCTTTGAGGATTATGTGTTTTTTTGTAAACCATACCTTTCCTCCCATATCTCATTGAATAGTTTTGTTCGAGATGTTTGATGAAAAATATTATG CAAAATTTGATAGTGTTGTATCTTGGTCCCCTTCATGGCTCACTACTTGTCTTCCTTGGCAGGTATTGTGTGACAAAGACCAAACTTCAAAAAAGGTTTC AACATTGGGCACTTATATGAGGCGAATCCTTGAAGTTAACAGGAAAAGAATCAAGGTGGTAAAATCTGCCACTAAGACTTCTTTTCCAACCACAGAAATA CGCGGTAGTTATGCCCCTCCATTTCATGTGGAGATTTTCAGGAATGATCAACACCGTCTAAAGATTGTAGTGGACAGTGAGAATGAAGCAGACTTGATGG TGCACTCCCGGCACAGTCGAGATGTTATTGTTCTTGTGATTCGGGGACTTGCTCAGCGATTCAATAGTACTTCCCTCAATTCTCTTCTCAAGATAGAGAC ATAAATTCTTTGTCATGCATTGTATATAGTCTTTGAATCTGGAAAACTAGGTTGATTGAGGGCAGTTATCTCATGTTTTTATTGTCCTAAGAGCAAGGAT TGTTACGTTGAGAGAACCGTTATTAATGCCATATACTTTGTAAGCCCTTGATTACTTATTCTGTTGGTTCACATATTATCATTTAAGGATGTGTATTAAC AATCTCATGCATATTTTGGCCTTTTGAGAATGAGTTCGTGTATATACAATTGAGTTTGAGACACTAGTACTGCTTATTTAATTGTAGTTTGCCGCTTACT TGTGTTTATGCTCAACATATGCATAATAGGTAGACTTTATTTAATGAGTATAAAATCAAGACTAAGTTTTAGTCTCTACACAAACCTCTC BLAST |
Tissue | pods |
Gene name | LI_gene_186225; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_300765
Blastp | 187-kDa microtubule-associated protein AIR9 from Arabidopsis with 65.9% of identity |
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Blastx | 187-kDa microtubule-associated protein AIR9 from Arabidopsis with 70.46% of identity |
Eggnog | leucine Rich Repeat(COG4886) |
Kegg | Link to kegg annotations (AT2G34680) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019416977.1) |
Pfam | Leucine Rich repeats (2 copies) (PF12799.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |