Ll_transcript_408274

• Id Trinity: TRINITY_DN51600_c1_g1_i1
• Name Transcript: Ll_transcript_408274
• Sequence: GCCCAACAAATTTTCATAGTGCCACTAACCTAACTCCAACCACAGCAACAAAATAAGCAGAACCTGTTCCAGTGAGGGTTTAATCATCAAAGAGATTGAA AATTTCATCATCATGGGAAGTAGATTGCGTGGAAGATTTGTTCAATTTGCAAACCTACCCATCAAACTATTGATGCCAACTTCCTTCACCAACATTCATG AAATTGCACTCAAAACCATTCCTTCAGCTTCCAAGATCGAAATCAAGCGTGTCCTTGAATCCCTCTACGGTTTTCAGGTAGAAAAGGTTCGAACTTTGAA CATGGATGGTAAAAAGAAGAAAAGGGGTGGTTTGTTAATTGCAAAACCTGATTATAAGAAGGCTTATATTACCCTTAAGCACCCTCTTTCTCTTAACCCA GATCTCTACCCTATTAGGATTGTGGAGAGGGAGAGGGAGAGTAAGAATAAGCAAGAGAAGTCTAGTGTTGTTGATGAAGGGGAGAGGAAGATGCATTGGC TTGATGAGAAGAAGAAGGTTGAGAAGTTTAGGTATGAGAAGGGTGAGAGGTTCAAGTTTGATAACGGTGAAAGGCGTCCGAGGAATCGCGTTGTTCAGCG TGTTAATCGGGTTGTTGCTAAGTTTCCTTGGAGCAATATGAGGACTGGTGGTGGTGGTGGTGATACTAGGTAGTTAGTTTATAACATGTTTGTGTTTTGT TTTGTTTTGTTTTGTTTAAGGATTGAAATGTTGTGATCATGGGTTTCTATGGTTCAGTGGATTTTGTTTATTAATCTTGGTTATGCTAATTGTTATAATG AAATAATGATTTGACTTTTTTTATGATGGTTTCAATTGTTAGTTGTTGTTAACACTTTTTTTCTTATCATGTCAATGTGTTGTTAAATTAATACCGAAAT AGTTTTTTGTTGTTGTGATATGTAACTGATTCTGTTTTTGTTTGTAATAGTTGAACATCACAATTTGTAGGTTTAGAAGCTATGAAATATAGTATGAGTG ATTCTTTCGGAGACGGG
• Tissue: pods
• Gene name: LI_gene_186235;
• Additional information: details;

Expression of Ll_transcript_408274

FPKM

• PAB: 12.2
• PNAB: 29.3
• PS1: 19.1
• PS2: 17.5
• PS3: 19.1
• PW1: 17.9
• PW2: 19.5
• PW3: 15.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_408274

• Blastp: 50S ribosomal protein L23 from Aeromonas with 45.76% of identity
• Blastx: 50S ribosomal protein L23 from Aeromonas with 44.26% of identity
• Eggnog: One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome (By similarity)(COG0089)
• Kegg: Link to kegg annotations (AHA_0311)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414228.1)
• Pfam: Ribosomal protein L23 (PF00276.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;