Ll_transcript_408174

• Id Trinity: TRINITY_DN51604_c0_g1_i13
• Name Transcript: Ll_transcript_408174
• Sequence: GTGAAACTAATCTCCATGTTCAACCGCCGCCTGTAATAAGAACAAGAACAAGAACAACAACATCATATATAGATCAGAACAGTGAGTTAATGTCTTCCTT TGGTTTCATACTTCACAACCATAGGACCAAACAAAAACTCACCCATTATTTATACTCTCTATATTCATCATAATCTCATCCACCCCATTTCTCTTTTCTC ACAAAGAAACAGTTTTGAACCACTCTAGAGTCACCATAAACAAAAGGCTGAGGAGAAATGAAGTATGTGTTGGTGACAGGTGGTGTTGTTAGTGGACTTG GGAAAGGAGTTACTGCTAGCAGTATTGGGGTTCTTCTTAAGGCCTGTGGTCTTAGAGTTACTTCTATCAAGATTGATCCCTACCTGAACACTGATGCAGG GACTATGTCTCCTTTTGAGCATGGAGAGGTGTTTGTCTTAGATGATGGTGGAGAGGTTGATCTTGACCTTGGAAACTATGAACGTTTCTTGGACGTCAAA TTAACCCGTGATAATAATATCACAACCGGAAAAATATATCAGTCTGTTATTGAGAAGGAGAGAAGAGGAGATTATCTTGGAAAGACTGTTCAGGTTGTTC CACACATAACAGATGCCATCCAAGACTGGATCGAGCGTGTTGCAAGGATACCGGTTGATGGCAAAGAAGGGCCAGCTGATGTTTGTGTCATTGAATTGGG CGGAACTATCGGCGATATTGAGTCTATGCCTTTTATTGAAGCACTTGGCCAATTTTCATACCGTGTAGGCCCTGGCAACTTCTGTTTGATTCATGTCAGC CTGGTTCCGGTACTCAATGTTGTTGGTGAACAGAAAACAAAGCCAACTCAGCACAGTGTTCGACAACTTAGAGGATTAGGTTTGACCCCTAACCTTCTCG CTTGCCGAAGCACAAAGGAACTTGATGACAATGTTAAGGCAAAACTTGCTCAATTTTGTCATGTGCCGTTGTCAAACATAGTTACTCTCCATGATGTTCC AAATATTTGGCACATTCCTTTGCTATTAAAAGACCAGAAAGCGCATGAGGCGATCCTGAAAGCTCTAAATCTGTTAAGTGTTACTAAAGAGCCTAATTTG AAGGAATGGACTACAAGGACAAAAGTTTATGACGAATTTCATGAAAATGTTAGAATTGCGATGGTAGGAAAATACACTGGCCTTTCTGATGCATATCTTT CTGTTCTTAAGGCACTTTTACATGCTGCTGTTGCACGTAATCGTAAACTTATTGTGGACTGGGTTCCTGCTGAGGATCTTGAAGATGTTACATCGAAACA GGATCCTAATGCATACAAAGCCGCTTGGGAACTTCTGAAGGGTGCTCATGGTGTTCTAGTTCCAGGAGGTTTTGGTGACCGAGGAGTGGAAGGGAAAATT CTTGCTGCGAAGTATGCTCGAGAGAATAATATCCCATATCTTGGCATTTGCTTGGGAATGCAAATTGCTGTCATTGAGTTTGCGCGATCTATCCTCGGCA TGGATGATACTACCAGCACAGAATTTGATCCCAAGGCAAAGAACCCTTGTGTCATATTCATGCCAGAGGGTTCAAAGACTCATATGGGAGGAACCATGCG TCTGGGTTCAAGGAGAACTTACTTCCAAGTTGCTGACTGCAAATCAGCCAAGCTGTAAGAATTTGAAATCAAACTCCAGTTTACTGACTTAAATATGAAC ATATTACATATGCTATAATTTCCTAAGGGGCACCATACTGATAAATGCGCTCCTGCACTTGAATATATTTATGTGAAATTTTGCATCATCTTTAAACCAA AAAAGAAAGTTCTTTGTCCCATGTACAAGTTATGATTAATTTGAAGTACTGTCTTATTGATCTCCATCAAACATTGATATCATGTTTGTGATGCTACAAT GTGGAATTTGACATAGGTATGGTAATGCGAGCTTTGTTGATGAGCGACATCGTCATAGATACGAGGTTAATCCTGACATGATATCACAATTTGAGAGTGC TGGTCTATCTTTCGTGGGCAAAGATGAAACTGGGAGACGTATGGAGATAATTGAATTGCCTGGTCATCCTTTCTTTGTCGGTGCTCAGTTTCATCCCGAG TTCAAGTCAAGACCAGGGAAACCTTCTCCACTATTCTCAGGATTAATTGTAGCAGCATGCAAAATGAGTAGGACATTTCTGCCAGCAAGCAACGGCCATG CCAAGTTAACTAAAGGTATACATAATGGACACTTGTCGGTAAACACACACACCGGAAATGGGTCCAAATCTCCCAATGGTTCCATATATGGTGTACACAC CAACGGCAACGGCCTACACGCCGATGGGAGCTGTTAATCATCTGCTTTTTTTGCATACAATTTTGGTTTTGTTTTCTCCAAGGACTTTCTGATCCACGGT TACATCTTGTACAGTTTTTGAGTGGATAGATGTGTTATAGCTCTAGGCAGATTTATCTCCAACATGAAGCAAATTTTGAGTCTAGTAGCTTTTATATTTC CAAGAATATAGGATGAAACTTATGGATATTATTTGTCCACTCTGAATCAAAATGGCTATTGCTTATCATGGTTAATTTGCCTAGGCCACCTTAAATTTCT TTGGTATTGAGCTGTAATGTTGGATAATTGGCATAGATGTACCTTTGTTCCAATGATAATAATATCATGTGAGCATGAAACACCTTTTAGTTGCTGAGTT TCCCCTGAGAAAAGTAGAGGCATTCATAGCTGAAGTGAATCACAT
• Tissue: pods
• Gene name: LI_gene_186265;
• Additional information: details;

Expression of Ll_transcript_408174

FPKM

• PAB: 0.2
• PNAB: 0.2
• PS1: 0.2
• PS2: 0.4
• PS3: 0.2
• PW1: 0
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_408174

• Blastp: CTP synthase from Dictyostelium with 62.37% of identity
• Blastx: CTP synthase from Dictyostelium with 62.12% of identity
• Eggnog: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (By similarity)(COG0504)
• Kegg: Link to kegg annotations (DDB_G0280567)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443663.1)
• Pfam: CTP synthase N-terminus (PF06418.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;