| Id Trinity | TRINITY_DN51604_c0_g1_i18 |
|---|---|
| Name Transcript | Ll_transcript_408179 |
| Sequence | CATAACACTGAGTTAGGTGCTAGTAAGGCTCTGCTGGATCCCCAGAAAGACGAGAAGTTAAGCTTTCGATTATGAGGAGTGATATTTGTTAGTAGAGATA GCCGTATCCCTAACAAAGTTTTAGTTTCTTATGCATAGAATGAAGGTACACCTTTGTTAGTATAAAAAAAGAGAGGGGTTAGCAGGTCTTAGTATAGCCC TACTAGATCCACAGAAAGACCAGAAGGCAAACTTTCGATTCTCGAGAGTAACATTTATTGGGAGAGACGACCATATCCCTAAAAAAGTATTAGTTTATTA AGCATAAAATGAAGAGATATCTTTGGTAGTACAAGAAAAAGAGGGGGTTAGTGGGTTTTAGTAGCATAATAACTACATAACTGGTTCCTCCTACTTCCAC TATATAATATTTGTGTGTTTTTTTCAGTTCTAGATTGTATTTTGTTGTTTTTCATAGTGCTGATATATATTGTTGTTCTGGTTTTGTGCATTTTGTTTGG TACAAGCAGCTGAGGAATAATTTCCATTGTCTTAAACATTTGAGAGAGAAGAATGAAGTATGTGTTAGTGACAGGTGGTGTTGTTAGTGGACTTGGTAAA GGAGTCACTGCTAGCAGTATTGGGGTTCTACTGAAAGCATGTGGTCTTAGAGTTACTTCTATCAAGATTGATCCCTACCTGAACACTGATGCAGGGACTA TGTCTCCTTTTGAGCATGGAGAGGTGTTTGTCTTAGATGATGGTGGAGAGGTTGATCTTGACCTTGGAAACTATGAACGTTTCTTGGACGTCAAATTAAC CCGTGATAATAATATCACAACCGGAAAAATATATCAGTCTGTTATTGAGAAGGAGAGAAGAGGAGATTATCTTGGAAAGACTGTTCAGGTTGTTCCACAC ATAACAGATGCCATCCAAGACTGGATAGAGCGTGTTGCACGGATACCAGTTGATGGGAAAGAAGGGCCAGCTGATGTTTGCGTCATCGAATTGGGTGGAA CTATAGGGGATATTGAGTCTATGCCTTTTATTGAAGCACTTGGACAATTTTCGCACCGTGTAGGCCCTGGCAACTTTTGTTTGATACATGTCAGCCTGGT TCCTGTACTCAATGTTGTTGGTGAACAGAAAACAAAGCCAACTCAGCACAGTGTTCGGCAACTTAGAGGATTAGGTTTGACACCTAATCTTCTTGCTTGT CGCAGTACAAAGGAACTTGATGATAGTGTTAAGGCAAAACTTGCTCAATTTTGTCATGTGCCGCTGTCAAACATAGTTACTCTCCACGATGTTCCAAATA TTTGGCACATTCCTTTGCTTTTAAAAGATCAGAAGGCGCACGAGGCAATCTTGAAAACATTAAACTTGCTAAGTGTTGCTACAGAGCCTAATTTGAAGGA CTGGACCTCTAGGACAAAAGTCTATGATGACTTTCATGAAAATGTTAGAATTGCGATGGTGGGAAAATATACTGGCCTTTCTGATGCATATCTTTCTGTT CTGAAGGCACTTTTACATGCTGCTGTCGCTCACAACCGTAAACTTATTGTGGACTGGGTTCCAGCTGGGGATCTTGAAGATGTTACTTCTGAACAGGATC CCGATGCATACAAAGCAGCTTGGGGACTTCTGAAGGGTGCTCATGGGGTTCTAGTTCCAGGTGGTTTTGGTGATAGAGGAGTGGAAGGAAAAATTCTTGC TGCAAAGTATGCTCGAGAAAATAATGTCCCATTTCTCGGCATTTGCTTGGGAATGCAAATTGCTGTCATTGAGTTTGCACGATCCATCCTTGGTCTGCGT AATACTACTAGCACCGAATTTGATCCTGAAGCCAAGAACCCTTGTGTCATATTTATGCCAGAAGTATATTATCCTATATTACTGTGCCACCGATATGTAA TATTGTTCCTTTTGACAATCTAGTTAATCCGGTTTGTTTTGTATTGATAGGGTTCGAAGACTCATATGGGAGGAACCATGCGTCTTGGTTCAAGGAGAAC TTACTTCCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_186265; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_408179
| Blastp | CTP synthase from Dictyostelium with 61.81% of identity |
|---|---|
| Blastx | CTP synthase from Dictyostelium with 59.13% of identity |
| Eggnog | Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (By similarity)(COG0504) |
| Kegg | Link to kegg annotations (DDB_G0280567) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426246.1) |
| Pfam | CTP synthase N-terminus (PF06418.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |