Ll_transcript_408184

• Id Trinity: TRINITY_DN51604_c0_g1_i23
• Name Transcript: Ll_transcript_408184
• Sequence: TCACACGCCGTCTGTAACAACAACAGGACACACCACACACAGAGAGAGGAAGAACATAACATAACACTGAGTGTATGTATCTTCTTTTTGTTTCATATTT CATAACCATAGAACCAAAGCAAAAACCACCCACAATTGAAATTCACATAAATCATCTTAATCTCATGCACCCCATTTGTGAGAAACAGTTTTGAACCATT CTAGAGCCACCCAAAACAAAAACGTTCAATTTTTTTCACTTTCTTAATGTTGGGTGTGTTCTATTGCTATAAAGAGAAAGGCTTTTTTTGGGTCCAATTT CAGTACATTAACCCAGAAAAGTAGTAAAGAAAGTACCTTGTAAAACCCGTCATTGTGTTAACAAGGTTCCCTTCATTATTTTCTCTCTCTCTTCTGTAGG GTGGGGTTTGTTGGAAATAAAATTTCACTCCTTTTTTGTTCTTATGAAGATATCTATGTTAATGTCTGTCACTGCCATATAGTTATATCTAGCTAGCTAG CTATCTAATATGTCTCTTTTATCTTATCCGAATCACCCTCCTTTTTTTGTTTCATGCCAAATTATAAAAAACGTGACTTTAAATTGTTTTTGTACTTTTG TTGTCATCATTTCATAGTTTTATCAGAGGGGGTTAGTGGGTCTTAGTAGCATAATAACTACTTAACTGGTTCCTGCTACTTCCACTATATAACATGTCTG TTTTTTCAGTCATAGGTTGTATTGTGTTGTGTTTCTTGTTTTCTCATTGTGCTTTCTGGCTTTGTGCATTTTGCTGTTGCATGCAGCTGAGGAGAAATGA AGTATGTGTTGGTGACAGGTGGTGTTGTTAGTGGACTTGGGAAAGGAGTTACTGCTAGCAGTATTGGGGTTCTTCTTAAGGCCTGTGGTCTTAGAGTTAC TTCTATCAAGATTGATCCCTACCTGAACACTGATGCAGGGACTATGTCTCCTTTTGAGCATGGAGAGGTGTTTGTCTTAGATGATGGTGGAGAGGTTGAT CTTGACCTTGGAAACTATGAACGTTTCTTGGACGTCAAATTAACCCGTGATAATAATATCACAACCGGAAAAATATATCAGTCTGTTATTGAGAAGGAGA GAAGAGGAGATTATCTTGGAAAGACTGTTCAGGTTGTTCCACACATAACAGATGCCATCCAAGACTGGATAGAGCGTGTTGCACGGATACCAGTTGATGG GAAAGAAGGGCCAGCTGATGTTTGCGTCATCGAATTGGGTGGAACTATAGGGGATATTGAGTCTATGCCTTTTATTGAAGCACTTGGACAATTTTCGCAC CGTGTAGGCCCTGGCAACTTTTGTTTGATACATGTCAGCCTGGTTCCTGTACTCAATGTTGTTGGTGAACAGAAAACAAAGCCAACTCAGCACAGTGTTC GGCAACTTAGAGGATTAGGTTTGACACCTAATCTTCTTGCTTGTCGCAGTACAAAGGAACTTGATGATAGTGTTAAGGCAAAACTTGCTCAATTTTGTCA TGTGCCGCTGTCAAACATAGTTACTCTCCACGATGTTCCAAATATTTGGCACATTCCTTTGCTTTTAAAAGATCAGAAGGCGCACGAGGCAATCTTGAAA ACATTAAACTTGCTAAGTGTTGCTACAGAGCCTAATTTGAAGGACTGGACCTCTAGGACAAAAGTCTATGATGACTTTCATGAAAATGTTAGAATTGCGA TGGTGGGAAAATATACTGGCCTTTCTGATGCATATCTTTCTGTTCTGAAGGCACTTTTACATGCTGCTGTCGCTCACAACCGTAAACTTATTGTGGACTG GGTTCCGGCTGGGGATCTTGAAGATGTTACTTCAAAACAGGATCCTAATGCATATAAAGTTGCTTGGGGACTTCTGAAGGGTGCTGATGGTGTTCTAGTT CCCGGAGGTTTTGGTGACAGAGGAGTGCAAGGGAAAATTCTTGCTGCGAAGTATGCTCGAGAAAATAATGTCCCATTTCTCGGCATTTGCTTGGGAATGC AAATTGCTGTCATTGAGTATGCGCGATCTATCCTTGGTTTGCATGATACTACTAGCACGGAATTTGATCCTGAAGCCAAAAACCCTTGTGTCATATTTAT GCCAGAAGGTTCAAAGACTCATATGGGAGGAACTATGCGTCTTGGTTCACGGAGAACGTACTTCCAAGTAGCTGAGTGCAAATCTGCAAACTTGTATAGT AATGTAAGCTTCGTTGATGAGCGACATCGGCATAGATATGAGGTTAACCCTGACATGATATCACAGCTGGAGAGTGCTGGTCTATCTTTTGTCGGCAAAG ATGAAACCGGGAGTCGCATGGAGATAGTTGAACTGCCTAGCCATCCTTTTTTCATCGGTGTACAA
• Tissue: pods
• Gene name: LI_gene_186265;
• Additional information: details;

Expression of Ll_transcript_408184

FPKM

• PAB: 0
• PNAB: 0.6
• PS1: 1.6
• PS2: 3
• PS3: 4.5
• PW1: 0
• PW2: 0.1
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_408184

• Blastp: CTP synthase from Dictyostelium with 60.52% of identity
• Blastx: CTP synthase from Dictyostelium with 60.5% of identity
• Eggnog: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (By similarity)(COG0504)
• Kegg: Link to kegg annotations (DDB_G0280567)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426246.1)
• Pfam: CTP synthase N-terminus (PF06418.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;