Ll_transcript_408167

• Id Trinity: TRINITY_DN51604_c0_g1_i6
• Name Transcript: Ll_transcript_408167
• Sequence: GCTAACTTCCTTTGTCACCCGCCGCCTGAAACAACAACAACAAGGAACACGGAAGAGGGAAGAAAAGGGTTCCATTTTTGTTCTAAAGGATTTCCACAAA AACCGAATTCCTCATTCTCTATAACCCATTAACCCTTCCATAATCTCTTCCCTTTTTCCATTTCCTTGTTTTTTTCTCATTCAGATTTCAGTAAAGGACC AATTTCGGTGTTAGAGGAAGAATGAAGTACGTGCTGGTGACCGGTGGTGTTGTCAGTGGACTTGGGAAAGGAGTCACTGCCAGCAGTATTGGGGTACTCC TCAAGGCCTGTGGATTTCGAGTTACTTCAATCAAGATTGATCCCTACCTCAACACTGATGCAGGTACAATGTCTCCTTTTGAGCATGGGGAGGTTTTTGT TCTAGATGATGGTGGTGAGGTTGACCTTGATCTTGGAAACTATGAACGCTTCTTGGACATCAAATTAACCCGTGACAATAATATCACCACTGGAAAAATA TATCAGTCTGTCATTGAGAAGGAGAGAAGAGGAGATTATCTTGGAAAGACTGTCCAGGTTGTTCCACACATTACAGATGCCATCCAAGAGTGGATAGAGC GTGTAGCACAGATACCAGTTGATGGAAAAGATGGCCCAGCTGATGTTTGTGTCATTGAATTGGGTGGAACTATAGGGGACATTGAGTCTATGCCTTTTAT TGAAGCGCTAGGCCAATTTTCATACCATGTAGGCTCTGGCAACTTCTGTTTGATTCATGTCAGTCTGGTGCCTGTTCTCAATGTTGTTGGTGAACCGAAA ACAAAACCAACTCAACACAGTGTTCGTCAGCTTAGAGGATTAGGGATGACCCCAGATCTTCTTGCTTGTCGCAGTTCTAAGGAACTTGATGGCAATGTTA AGGAAAAACTAGCTCAATTTTGTCATGTGCCGTTATCGAACATAATTAATCTTCATGATGTTCCAAACATTTGGCACATCCCTTTGCTATTAAGAGACCA GAAGGCGCACAAGGCAATCCTGAAAGCATTGAACCTGCTAGGTGTTGCTACAGAGCCTAACTTCAAGGAGTGGATCAGTAGGACAAAAGTCCATGACAAA TTTCATGAATCTGTTAGAATTGCCATGGTAGGAAAATATACTGGCCTTTCAGATGCATATCTTTCTGTGCTGAAGGCACTTTTACATGCTTCTGTTGCTC ACAATCATAAACTTATTGTCGACTGGGTTCCAGCTGAGCATCTTGAAGATGTCACTTTTAAGGAGAATCCTGATGCACATGAAGCTGCTTGGGGTCTTTT GAAGGGAGCTAACGGGATTCTAGTTCCAGGAGGTTTTGGTGATAGAGGAGTGCAAGGGAAAATTCTTGCTGCTAAGTTTGCCCGAGAGAACAATGTTCCC TTTCTGGGCATTTGCTTGGGGATGCAAATTGCTGTCATTGAGTTTGCAAGATCTATTCTAGGACTTCTTGATGCTAATAGCACAGAGTTTGATCCTGAAG CCAAAACCCCTTGTGTCTTATTTATGCCAGAAGGTTCGAAGACTCATATGGGTGGAACTATGCGTCTTGGTTCAAGGAGAACTTACTTCCAAGTTGCTGA CTGCAAATCAGCCAAGCTGTATGGTAATGCGAGCTTTGTTGATGAGCGACATCGTCATAGATACGAGGTTAATCCTGACATGATATCACAATTTGAGAGT GCTGGTCTATCTTTCGTGGGCAAAGATGAAACTGGGAGACGTATGGAGATAATTGAATTGCCTGGTCATCCTTTCTTTGTCGGTGCTCAGTTTCATCCCG AGTTCAAGTCAAGACCAGGGAAACCTTCTCCACTATTCTCAGGATTAATTGTAGCAGCATGCAAAATGAGTAGGACATTTCTGCCAGCAAGCAACGGCCA TGCCAAGTTAACTAAAGGTATACATAATGGACACTTGTCGGTAAACACACACACCGGAAATGGGTCCAAATCTCCCAATGGTTCCATATATGGTGTACAC ACCAACGGCAACGGCCTACACGCCGATGGGAGCTGTTAATCATCTGCTTTTTTTGCATACAATTTTGGTTTTGTTTTCTCCAAGGACTTTCTGATCCACG GTTACATCTTGTACAGTTTTTGAGTGGATAGATGTGTTATAGCTCTAGGCAGATTTATCTCCAACATGAAGCAAATTTTGAGTCTAGTAGCTTTTATATT TCCAAGAATATAGGATGAAACTTATGGATATTATTTGTCCACTCTGAATCAAAATGGCTATTGCTTATCATGGTTAATTTGCCTAGGCCACCTTAAATTT CTTTGGTATTGAGCTGTAATGTTGGATAATTGGCATAGATGTACCTTTGTTCCAATGATAATAATATCATGTGAGCATGAAACACCTTTTAGTTGCTGAG TTTCCCCTGAGAAAAGTAGAGGCATTCATAGCTGAAGTGAATCACAT
• Tissue: pods
• Gene name: LI_gene_186265;
• Additional information: details;

Expression of Ll_transcript_408167

FPKM

• PAB: 3
• PNAB: 8.4
• PS1: 7.7
• PS2: 11.9
• PS3: 9.8
• PW1: 8.8
• PW2: 8.1
• PW3: 6.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_408167

• Blastp: CTP synthase 1 from Danio with 59.89% of identity
• Blastx: CTP synthase 1 from Danio with 59.4% of identity
• Eggnog: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (By similarity)(COG0504)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413914.1)
• Pfam: CTP synthase N-terminus (PF06418.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;