Ll_transcript_409921

• Id Trinity: TRINITY_DN51606_c1_g2_i8
• Name Transcript: Ll_transcript_409921
• Sequence: CTCTCTTTTCAATCTTTTTCTCCAATATTTTTCTCCAACATTTTTCTCTTCATACTTCCTTCTATATGTACAAATACAACACATAGGAGGGATTTTCTAA CCCAGCGTTTATGCACCATGTCACTCCTCGGGATAGTTTATCAATAAATTATTATCACTGACTCAACAATGAAGAAGCTATATCATTTATCATTCACTTT TATGCATATTTACAAGTTCAACTCTCACCCACGAATCATAAATACCTTCCCATCATTTCTAAGTACTCTTACAATCAGATTAGCGTCCACAATTAGTTTA AGTGTGGACATGAAACGCTGCAATTCTTCCATCTCAACGCTTTGCAGGGAAGGGAAAATTGATCATGCACGCAAGTTGTTTGATGAAATGTCTGAACGTG ACACTGGTTTGTGGACTACAATGATAAGTGGGTACATCAAGTGTGGTTTGATTAAAGAAGCAAGGAAGCTATTTGATAGACTTGATTCAAAGAAAAATGT GGTCACATGGACTGCTATGGTGGGTGGGCACATAAAGTTTAATCAAATTAAGGAAGCTGAGAGGTTGTTTTATGAGATGCCGACGAGGAATGTTGTGTCG TGGAACACGATGGTTGATGGGTATGCGCGAAATGGCCAAACCCAGATGGCTTTCGATTTGTTTAGGAGGATGCCAGAGAGGAATCTGGTGTCGTGGAATA CAATCATAACGGCGTTGGCACAGTGTGGGAAGATTGAAGATGCACAGATGCTTTTTAATAAGATGCAAGAAAGGGATGTGATTTCGTGGACTACTATGGT CACAGGGTTGTCTAAAAGTGGGAGAATTGATGACGCTCGGGTACTTTTTGATAGGATGCCTGTCCGTAATGTGGTTTCGTGGAATGCAATGATCACGGGT TATGCGCAGAATAGGAGATTGGATGAGGCTCTAGAGTTGTTTGAGAGAATGCCCGAGAGGGACATGCCTTCATGGAATACAATGATCACTGGTTTCATTC AGAATGGGGACTTGAATCGTGCAGAGAAGTTATTTGATGAAATGCCACAAAAGAATGTCATTACTTGGACTGCGATGATGACAGGGTATGTGCAACATGG CCTAAGTGAAGAAGCATTGAAAATATTTAACAAAATGCAAGCTCATGATGATGGATTAAAACCTAACACTGGAACCTTCGTGACAGTGTTAGGTGCTTGT AGCGACTTAGCTGGTCTTACTGAGGGACAACAAATTCATCAACTAATAAGTAAAACAGTTTTTCAGGACAGCGCATATGTGGTATCCGCGCTGATAAATA TGTACTCAAAATGTGGAGAGTTGCATATTGCTAGGAAAATGTTTGATGATGGTTTATTAAGCCAAAGGGATTTGATATCTTGGAATGGTATGATTGCCGC CTATGCACACCATGGATATGGCAAGGAGGCAATTAACCTATATAATGAAATGCAAAAATTTGGTTTCCAAGCTAATGATGTCACCTTTGTTGGACTTCTC ACTGCTTGCAGTCACGCCGGTTTAGTCGAAGAGGGCCTTAAGTACTTCGACGAGCTTCTAAAAAACAGATGTATACAAGTCAGAGAAGACCACTATGCAT GTTTGATAGATCTTTGTGGTCGGGCAGGAAAGCTGAAAGAAGCTTACAATATCATTGAGGGACTTGGGAAAGAGGCTTCATTGTCTGTTTGGGGAGCTCT CCTAGCAGGATGTAATGTGCATGGAAATGAAGGTATTGGGAAGCTTGTTGCTAAGAACATTTTGAAAATTGAACCAGACAATGCAGGAACTTATTTATCA CTTTCAAATATGTATGCTTCAATAGGGAAGTGGAAAGAAGCTGCCAATGTCAGGATGAAAATGAAGGACAAGGGGTTAAAGAAACAGCCAGGTTGTAGTT GGATTGAAGTTGGCAATACAGTGCAAGTATTTGTAGTTGGTGATAAGTCACATTCTCAATTTGAGCGGCTTGGATATTTACTTCTTGATCTACATAGAAA AATGAAGAAGTCTGGGGACAAGACAAATGATGATTTTTTAGTAATATAAATCTGTTTTGCCTAAAGCTTGGAATATGCAGTGGACTTGACATTTGAGAAA GTTTACTGATATTGGTACATCACATTCACACCTTTAACTTCATTTTTCTTCTTGTTCTACATGCAAAATTGAAGAAAAGCCAGATGATGAACTATTAGTT GGTGTGGGATTTTAGTAAATATAAAGCTGTTTTGGTGGAAGCTTGGATCAAGAAGTGGAGTTGATATCTGTTAAAGTTTACTGGTATTGATGATGTTTAT TAGAGACATTTTGAGTGAATTTAGTGATGAGGAAGATATTGAACTATGTGATGATGATGATGAGATTGAGAGTAACGAACCAGCTAGTGTAACATATGTT AATCCTTCATCTTTTTTCGTTAATGTTGATGCTGCTGCTGGTCAAGATCTTAGTTATAGAAATAATCATTTAAGTAGTGATTGTGATAACGAATTGTTTG TGGGAATGCAATTTGATTCAAAGGAAGCTACAATAAGTGCTATAAAGCATTATCATTTTAGGCATTCTTTTGATTATATTGTTTCGGACTCTAGGCCGGA TATATATGTTGGTAAGTGTGTACATTTTGGGGCTGATTGTCAATGGAGAATTCGTGCGTCGAAAAATTGTAAACGTGAGATTTGGGAAATTAGGAAAATT AGTGGACCACACACTTGTGTGTCCACTAATATCTGTCAAGATCACAGAAAGTTAAACTCTTCTTTCATTGCTGATTGTATTATTCAATTAGTTGTAGCAG ATCCCGGTATCCCAATCAAAGCATTAGTTAAAGAAGTACTTAGTCGTTTCGGGTACACTGTGACATATAGAAAAGCTTGGATAGCTAAGCAAATAGCAAT GTCAAGAATTTTTGGTGATTGGGAGGGATCCTATAAAGAGTTACCTCGTTGGTTTAATGCTGTGCAGTGGTATCTACCTGGTACAATTGTAAGATATGGA GCATCCAATCATGACAGTCCGAATACTTATATTCTGGATAGGGTGTTTTGGGCTTTTAAGCCTTGTATTGAAGGATTTGCATTTTGCAAACCAATCCTTC AAGTTGATGGGACATTTTTGACTGGAAAATATAATGGAACATTGCTTATTGCTAGTTCTCAGGATGGTA
• Tissue: pods
• Gene name: LI_gene_186282;
• Additional information: details;

Expression of Ll_transcript_409921

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0.2
• PS2: 0.1
• PS3: 0.3
• PW1: 0.3
• PW2: 0.1
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_409921

• Blastp: Pentatricopeptide repeat-containing protein At2g35030, mitochondrial from Arabidopsis with 60.07% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g35030, mitochondrial from Arabidopsis with 60.07% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G35030)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420652.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;