| Id Trinity | TRINITY_DN51609_c2_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_410705 |
| Sequence | TAAATATAAAGGGTGAAGATGCAATGACAGTGCATAAAACTCATACACTGTCAGTGCATACATTTTAACTCTTATTAAAATGAGTTGTTCTATTTTGACT TTACCTTTGTATTTGCTCCGACATAGAAGAATCAGAACTTTGTTGTCATTTTCCCTTTCCTATGATTCTTTAGACTTTGCACTGGGATATTTTCATATTA AATTTTTGTTTTTTTATTGAATTTTATCTCCCCCCTTTTGCTTTTATTCTCTATTGCTTTTGGTGCTTTACTTTCATGTAGTGGACACTGTGAACCCCAC CAATGGAATAAATTGATTACACAGCTTCTGTCTTTGTTGCAACTTTCTTTTTTCCACCCCTAACATGATTTAGTATTTTTTGTAATAGGTTATTCTGGAA ATTCTTGATTTACTGTGTAATTATTCTTTAGATTGCAAATAGGCAAAATATGATGATTTTGTTTGTTTAACAAAAATGACATCAAATTCATGCTACAAAA TATAATGATTTTGTTTCTTTAACAAAATGGCATCAAATTCATTTTTTACAGTTGAAGTCTTAAAATATGTCATAGTCATGGTTGAGGATTAGAATATAGG GAATATAATCAGGGTGGTGATTTACAAGACATGTAAATTTACTCCCTTGATGTGTTCCTTGAAGTCCAAATTCTAAGGAGCTTTATTTACTTGTTTGCCA TTGTAATTGTGCTTAAATGCTAAAGTTTTCTAATTTTCTTTTTCTTTTACATTGGGTTCCTTCTTTGTGTTGAACACACCATGAGTAAGTGATATTTCAA ACTTCAAAGCTGCCCCTGATGCATTTGTTGAAGAGAATGTCAAGTTGTTTCTGGATCATGCCATTAAGAAAGTTTGAATAGCTAAACACAATTTGGACTT TGAATGATGCTTTGGGTTGTTATGATCTTATGTCGGTTAAATTGTTAGAACTTAGAAGTTAGTAGTAGTGGAACTTCTGAGTTCCTAAAATCAACTGTAG TTAAATTCTTAACTGTCTAATAGTGGCAATATAATTCCTAAAATCAAGTGCATTTCTCATATATTAGGATTTATGCACTTGTAGTACTTTTATTTACTTT GTTTTTAGGTTTCTAATCTTTCTTTTTATGTTTTTCTAGTATCTGGACTTTCCGGTACTGCTGAGACTGCTCAAAGTCAGGTCTCTGTTGGAATGGGTCT GCTAGCTGGGTCAACAGTTATGCTTCTGACTGTAATATGGGGGACCTGTGTAATTGTTGGCAAGTGTGACCTTGAAGGTTCAATTGCAATAGATTCGCGT GATACCAGGGGATTTCATTTAACCAGTTCTGGTGTTAGTACTGATATTTGGACAAGTTATGCTGCTAGGATTATGGTTTTATCTGTCATTCCATTTTTGA TCGTTCAGTTACCGCAATTGCTCAGCTCAACTTCAGGAAGGCACTTCGCTATTTTGATTGCTCTTGTTGTCTCCATCTGTTTATTGATTGTGTATTGCCT TTACCAGGTTTTCCAGCCCTGGATACAGAGGAGAAAACTTTCATATGTTAAACACAAACATGTAATCTTAGGACTTTTGAAACATTTGAAGCAACGTGCA TTGGGAAGGCTGCTAACAGAGAATGGTGAACCTAACATAAAAATTATAGAAAAGTAAGGTTATCTCTCCTTTTTGCTTTGACTTCAGAGATGTTACTTAC AAAGCATACATTGTGGTCTTTTCATATGTTCATCCATTTGGTTTTCTCTTCCTTCTCAATGGAATATACAGGTTGTTTGATACAATTGATGAGAATAAGG ATGGTGAACTTTCTCATCGTGAATTGAAAGCACTGGTTGTGGGAATTCAATTTGAGGAGATTGACCTGGATCATGAAGATGCTGTGATAAAAATAATGGA GGACTTCGATGCTTCTCATAATAATCGTGTTGATAAAAAGGAATTTGTTAGTGGCACCTGTAAATGGCTTCAAAAGGCTAAGGGTTCTCGAGTTGCATCT GGTGATGCTGGTGCACACACAATGAAGTTTTTAAGTGATTTTCACGATGAAACAAAGAGGGAGCACGATCTTCTTGATGTTGGGGGTGAGAGTGATGAAG TCATTGAAGGCGTTGGAAATGCTGGGTGGACTACCGTCAAAGCTGTGCTGCTGCTGGTGCTGGGATCTCTTATTGCTGCTGCATTTGCTGATCCTTTGGT TGATGTAGTTCATAACTTTTCTAATGCTACAAGTATTCCTGCTTTTTTCATTTCCTTCATTGCTCTGCCTTTAGCCACCAATTCAAGTGAAGCAGTGTCG GCAATAATTTTTGCTAGTCGTGATAAGAGGCAGACTGCCTCACTAACATTTTCCGAGATATATGGGGCAGTGACAATGAACAATGTGCTTTGCCTATCAG TCTTCTTGGCCCTGGTTTACGCGAGGGGTTTGACATGGGACTTCTCTTCGGAAGTGTTAGTTATTCTCGTCGTCTGCGTCGTCATGGGCGCCTTTGCCAG TTTCAGAACCACCTTCCCTCTATGGACATCCATAGTAGCCATCCTCCTTTATCCTTTCTCCTTGGCATTAGTCTATGTTCTTGATTATGTATTTGGTTGG TCATAGACCATATAACAATGTTTTCTATGTGTTAGTGCCCTGTATGGCTATTACTCTTGGAGTGTGTGTTTATTATAAGTTGTGTTCTAGAGATTGTGTG GTGTTATTGATTCCAAGTTGGGATTGACATGAAATCGAGAATTTGGGATTTTAATTATGCCCTTTTCATGCATTCTTTATTAGTATAGTTTTTTTTGGTA TTATAAATGTATCCCTTCGTCTTTTTAGGTAAGGAACTAATCATTTTGGGGTGTAGTTATTTCTCTAAACAAGTGCCACTTTCAAGAATCGAATATTTGA CCTTTTGGTCAATATGGAGATTTCGGAGCCTTACATCACTAGACCAATACTTTACTGGTGAGAATAGGTATTGTTTTGACACAATTTGCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_186301; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_410705
| Blastp | Sodium/calcium exchanger NCL1 from Oryza sativa with 68.22% of identity |
|---|---|
| Blastx | Sodium/calcium exchanger NCL from Arabidopsis with 66.67% of identity |
| Eggnog | Calcium-binding EF hand family protein(ENOG410ZVKW) |
| Kegg | Link to kegg annotations (4325568) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456227.1) |
| Pfam | Sodium/calcium exchanger protein (PF01699.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |