Id Trinity | TRINITY_DN51611_c3_g2_i6 |
---|---|
Name Transcript | Ll_transcript_408875 |
Sequence | GTAAAAGAGTTACTCTTGGAGTAACTTGATCCCCACTCATATATAATATAATAACAATGTATGAAACTCATATACTGTTAATACATATTTTTTTTAATTT AAAACAAAACAAAATAGTAGCAGCTTATTAAACTATAACTTGATGCTTTAAGACCGGGAGGAAAGTAGGTTGGTGTAAATGGCCAATTGATGAATCAAAA TGAATATTTAAGCTGTAAGTAAGACTTGGCTTTAGTCCAGAAACTCATAGCAACTAACTGAAGTACTATATATATCTCTCTCCTCCATTAATTTTTGTAA TTGTCTTCTGCTATTTTTGTCTTGCCACCAAATCTTTATAGTGCACCCACCACCAAATGTATATATGATTCCACGTTGAAAACTATGTGCATGCATGGAA ATTTTATTAACTTTGCTACTTCATCTCCACCACTCTTATTGTCTTTCTCTCCATAATAATAAAAGTATGATTATAATTGATAAACAATAATTAATATAAT GCTAGATTTTATAAAATAACAATGAAAAGAATTTAAAAAAAACGAGATTTATAAATGTCGTACAACACATGATTTGACGAATGTGGATCGGTTGTTCCAT ATTTTGGTGTCCCATGATGTCCTGCACCAATGAAAAACTGTCACCTACTCAAAACCAAAAGTAAAAAAATAAAAAATAATATTTTTATGTTATGTGATAG TATATGATTGGTTTGGTACATGTGGATAGGAAGTTTTGGAATAGAGGATCTTGATTATACATGCATGCACTGATTAAGTTGTCCAACCTAATTAATCAAG TCCAAGATCTTTATTTTTGTACGCCAAATAGTAACATTGTTTGCGTCATTTTAATCTCAAAATAAATACATAAAATTATCTTGGAACATTTATAGCCGAC ATGCGTGCATGGTGATGAGGGAGATAAATATCTTCCATAATGGCATGTCCTGAAAAAAGGCATAGCTATTATTATTAGAAACATTAAAGGAGAAAATTAA AGCTTCTCACCTGGCCACACTTCCAAGAATAATCCAATATTCTTCCATGCAACTATATGAACTTGATAAAATAAAATAAAAATGAGTAAATAACAGTAAA TATTATAAAGATGTCACTTTTCAACTTGTGATAATTTTAATTGTTCTTGGGTTTTTGATGAATATTTTGACACAAGTTTAGATAAAAAATAATTGTCAAG TAAAATTTGATACAGCTAGTAGAAACGTGTGTATTCATATTATATTTGAAGGGTTAATTTGCAGGATGTTTATAGAATCATGCAAAAGGCTGAGGATTAT GAAGAGATCGAATGCAAAGGGATGAAGACTGCAACCAAAAGGTTCTTTAAAGGGATTTATAGAAGGCGTGACAAAGTGAAAGATAGATCGGAAAGAAAAG AAGATAAGATTCTATTTAATATAATGTCGTACACGTATTTGATCATTTCAAAACTATGTTGTCGTTTTATTATATTTGAGGAAGCAATATAATTTGATGC ATGAATCAAACATTGTTTATAATAAGCCTAAGAATGAATGATTTTTAAAGTACCATGTTTAATGAAATAGGGAAAATTCGTGGTTTCAGTAAATGGTTTA CCATGCATGAATCCATTTTTATTTTTATGATACTATCGAAAGATATTTCTTCAAATTTCGGGTAAAAACTTAATTCTTTTTAGATTTGTGACTGTCCCTC CTCACAATTATCGCTCACAGAAGTCGAACTCTCGAGCTTTGAGAAATCTCATTTTCCATTTCATCTACGTTTATTTATTTATTTTGAGATGTCCATTAAT TTTTATGTTTATCGTGGAATTTCTATAGTGCACCCAATCATGAACCATGATATCCCTTTATTAACAAGTTTGCCCTTGTTATTAACTAGGCTTGATTTTA TTCCTCCACTCAACTCAAAATATGTTTGACTCGAAAGAATAAGATGAGCAATTTAAAGATGAAGAAGAAAAAGAAATGACATTATGATCAATGCTTTGTC ATCAAAATTGAATGTTGATGTTGGGAATCGATTATGACATTATGACCAATGCTTTGTCATCTAGAGCCACCAAAGATGGCATATAATAGTGAACATAAGT ATTCTATACCTACTATTTTATAATTATCATATATTTGTCTTTAGGGTGTTTAAATCTAGACCTGTTCAAAAAGAAAATCGAAAATTGATCCAAAATAGAC CGAAACCGCAAAAACCGAAAATGTTTGGACTGTATTGGACTTTTTTATTAGAAACCGATTGGTCCGGTCTGGTTTTTGGATCCACCTCTTGGATCCAGAC CAGTCCAGACCAAAATTGTTTAAGTGTATATTTATTACAAGTAACTTCAACACTAAACCATATGTCCAACTCCTAAATTGTTCCTCATTGTCTAAATTGT TTAAGTGTTATCTTACTTTGTTACCGTTAC BLAST |
Tissue | pods |
Gene name | LI_gene_186316; |
Additional information | - |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_408875
Blastp | - |
---|---|
Blastx | Auxin-induced protein 22C from Vigna with 86.11% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (NP_001242293.2) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |