Ll_transcript_410461

• Id Trinity: TRINITY_DN51613_c0_g1_i10
• Name Transcript: Ll_transcript_410461
• Sequence: CATACATCCCCCAAGTTCTTATTGGGGGAGACAGCCTGGTTTGAATTTCAACAACAACAACATCATAATCCCTCTTAAATTACATCTATACCCATAGCAG TTCCACTCCTGTCTCATTCTTCCCATGTTATTTAACAAGGACAAAAGGGTCATTCAATCACCCATCAAAATCACCACCACTAACCGTTGCAAACCACCAC CGGCACAATTTCCCTCCATTTTCCTTTCTCCAACCACATTCAGCAACACCACCAAACCCTAACCCTAATTCTCAAATTCCCAATTCAATTTCCCGATTTG GTTCTACAATCTTCGAATCAACATGGGCGATTTCAACGTCGCCCTTGTAATCGTTGCCATTGTGGTTTGCATCATCGTGTTCCTCTTCAACGTGTACCTT CTCGTCAATTATCAGCACCCCGATGACGTCAACCAAGCTTATTTCCCCAAATTCGTCGTCGTTTTTGGTCTCTCCATTGCCGCCATTTCGATTCTCATGC TCCCCGCTGATGTGGCGAACCGGCAGGCATGTCGCAACGCGATCTACAACGGCGCGTGTAACCTCACGCTCCCTATGAAGAGCCTTTGGCTCGCAATTTA TATCCTTGATGCCGTTCTTGTCTTCTTCGTCATTCCCTTTGCTATGTTCTACTATGAAGGGGACCAAGACAAGAGTATTGGGAAGAGGATTAAAAGTGCA TTGATGTGGATGGTGACGACGGCGATAGTATGTGCTCTCATTCTGGGTATTTTGTATGGGCTCGTTGGGAAGGTGGACTTTACTGTTAGGCATCTCTCGT CATCAACAGCATCATTTCCTAGCTCATGGGGGGGATTGAGCAGTGGTCAACAATGTATAGGTGGAAGTGGAGTCCACCAGTGCTCAGCATACTCTGCTAG TCCCTCATCAGAGAAAACATGGACCATGCGTGCTACTTTTCCAGAATATGTTGTTGCTCTTGCTACTATTGTTGGATCTGTGCTTTTCTCTATATTTGGT GGCGTTGGCATTGCTTGTCTTCCACTGGGACTAATATTTTCATTTATCCGGCGTCCAAAGGCTGTTATTACTCGCTCACAGTATATCAAGGAAGCAACTG AGCTGGGTAAAAAAGCAAAAGAACTGAAGAAAGTTGCTCAATCACTCCATCAGGAAGAAAGAAGTGGTTCAAAGGGTAGAAAGTTTCGTAAAAATGTAAA GGAAGTAGAAAAGGAATTGTTTCAATTAGAAGAAGACGTAAAGCTTCTTGAAGAGATGTATCCACAAGGGGAAAAGGCTGAGACATCATGGGCAATAACA GTTATCGGTTATATGGCAAAACTTGTTTTGGGAATTTTAGGGTTGATTGTTTCAGTGGCTTGGGTTGCTCATATCATTATCTATCTATTAATTGATCCTC CACTTTCTCCTTTCTTGAATGAAGTTTTTGTCAAGCTAGATAGTGTATGGGGCCTTCTCGGCACAGCGGCATTTGCATTTTTCTGCTTCTACCTTCTCCT TGCTGTGATTGCTGGTGCCATGATGGTTGGGCTGAGACTAGTTTTTGTTACTATACATCCGATGAAGTGGGGAGGGACTCTGATGAATTCTTTTCTGTTC AATGTGGGCCTTATCCTTCTTTCTTCAATTAGTGTGATCCAGTTCTGTTCCACCGCATTTGCCTACTATGCTCAAGCTACTGCTGCACAGGAAATATTTG GCCATACTTTGGAGTCTCTTCGTGGAATTAAATATTTGTACAAGTACAATGTATTTCAGATTGCATTTGTTGCTTTTGCTGGATTAACCTTTGTATATTA TGCTGCCTTCGGATGGAGAAGAAAAAAGCCTAGTGGCAGGTTTCAGTTATCCACATGAGGCATGACTTATCCTGGAAGAGTGTATTATTTGGGGAAAACC ATCAGAGAATACTTGTCTCATCATATCCATTAAAAGTGATCTTTTTATATATTGATGATGTTTTGGCCTAGTTTTGTTTCATGTTGAAAGCTATAAGTAA AAGCTGATCCATCATGATCTGAGTAGAGAATCATTTTTCTGGGGTGAAATCATTATTTGGGGTGCTTGTGTTTGCCTCTTTCATTACCTGTGTATTACTT TGTTTGATTTGTGTTCTACATTCTTCCAAGTATGTAAATTAAAGGTATCATTACAAGCACAATGCAATTCTTGCCAAGTAAAAAGTTGTACCACCACTTT TTCTAAATTGTTATATTTGTTTTCTTATGTTCATGTCTGTGTACCACATTTTTTGTATTATGAGGGAAAAAATGTATATATTGTGTAATCATGAATAAAG AAAGTATTAAATATATCAGTAAATGTATTTAAT
• Tissue: pods
• Gene name: LI_gene_186339;
• Additional information: details;

Expression of Ll_transcript_410461

FPKM

• PAB: 3.1
• PNAB: 10.8
• PS1: 6.4
• PS2: 4.4
• PS3: 6.8
• PW1: 5.8
• PW2: 7.7
• PW3: 7.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_410461

• Blastp: LIMR family protein At5g01460 from Arabidopsis with 83.95% of identity
• Blastx: LIMR family protein At5g01460 from Arabidopsis with 83.95% of identity
• Eggnog: LIMR family(ENOG410XRDU)
• Kegg: Link to kegg annotations (AT5G01460)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450339.1)
• Pfam: LMBR1-like membrane protein (PF04791.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;