| Id Trinity | TRINITY_DN51613_c0_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_410463 |
| Sequence | CATACATCCCCCAAGTTCTTATTGGGGGAGACAGCCTGGTTTGAATTTCAACAACAACAACATCATAATCCCTCTTAAATTACATCTATACCCATAGCAG TTCCACTCCTGTCTCATTCTTCCCATGTTATTTAACAAGGACAAAAGGGTCATTCAATCACCCATCAAAATCACCACCACTAACCGTTGCAAACCACCAC CGGCACAATTTCCCTCCATTTTCCTTTCTCCAACCACATTCAGCAACACCACCAAACCCTAACCCTAATTCTCAAATTCCCAATTCAATTTCCCGATTTG GTTCTACAATCTTCGAATCAACATGGGCGATTTCAACGTCGCCCTTGTAATCGTTGCCATTGTGGTTTGCATCATCGTGTTCCTCTTCAACGTGTACCTT CTCGTCAATTATCAGCACCCCGATGACGTCAACCAAGCTTATTTCCCCAAATTCGTCGTCGTTTTTGGTCTCTCCATTGCCGCCATTTCGATTCTCATGC TCCCCGCTGATGTGGCGAACCGGCAGGCATGTCGCAACGCGATCTACAACGGCGCGTGTAACCTCACGCTCCCTATGAAGAGCCTTTGGCTCGCAATTTA TATCCTTGATGCCGTTCTTGTCTTCTTCGTCATTCCCTTTGCTATGTTCTACTATGAAGGGGACCAAGACAAGAGTATTGGGAAGAGGATTAAAAGTGCA TTGATGTGGATGGTGACGACGGCGATAGTATGTGCTCTCATTCTGGGTATTTTGTATGGGCTCGTTGGGAAGGTGGACTTTACTGTTAGGCATCTCTCGT CATCAACAGCATCATTTCCTAGCTCATGGGGGGGATTGAGCAGTGGTCAACAATGTATAGGTGGAAGTGGAGTCCACCAGTGCTCAGCATACTCTGCTAG TCCCTCATCAGAGAAAACATGGACCATGCGTGCTACTTTTCCAGAATATGTTGTTGCTCTTGCTACTATTGTTGGATCTGTGCTGTTTGCTATATTTGGT GGCGTTGGCATTGCTTGTCTTCCACTGGGACTTATATTTTCATTTATCCGCCGTCCAAAGGCTGTTATCACTCGCTCACAGTATATCAAGGAGGCAACTG AGTTGGGTAAAAAAGCAAAAGAATTGAAGAAAGCTGCCGAGTCACTCCGTCAGGAAGAAAGAAGTGGTTCAAAGGGTAGAAAGTTCCGTAAAAATGTGAA GGAAGTAGAAAAGGAGTTGTTTCAATTAGAAGAAGACGTAAAGCTTCTTGAAGAGATGTATCCACAAGGGGAAAAGGCTGAGACATCATGGGCACTAACA GTTCTCGGTTATTTGGCAAAACTTGTTTTGGGAATTTTAGGGCTCATTGTTTCAGTGGCTTGGGTTGCTCATATCATTATCTATCTATTAATTGATCCTC CTCTTTCTCCTTTCTTGAATGAAGTTTTTATCAAGCTAGATAGTGTCTGGGGGCTTCTTGGCACAGCTGCATTTGCGTTTTTCTGCTTCTACCTTCTCCT TGCCGTGATTGCTGGTGCCATGATGCTTGGGCTGAGACTAGTTTTCATTACTATACACCCCATGAAGTGGGGCGGGACTCTGATGAATTCTTTTCTGTTC AATGTGGGCCTTATCCTCCTGTGTTCAATTAGTGTGATCCAGTTCTGCTCCACAGCATTTGCCTACTATGCTCAAGCTACTGCTGCACAGGAAATATTTG GCCATACTTTGGAGTCTCTTCGTGGAATTAAATATTTGTACAAGTACAACGTATTTCAGATTGCATTTGTTGTTTTGGCTGGATTGACCTTTGTGTATTA TGCTGCCTTTGTAAGTTTGCTTTTGTAAATCTTTATCTCCTAGTCTTTGTTAATATTCTTACTGATCCTAAAGGGTTTGTAAATATCAGGGATGGAGAAG AAAAAAGCCTAGTGGCAGGTTCCAATTGTCTACATGAGTCATTGCTTTACCCGGAAAAGTGTCTTATAGGGGAAGCCATTGGAGAATACTTGTCCCATAA TATCATCTAAAGTGGTTCTTATTTTCGGATGTTTCGGCCTATTTTTGTTTCATGTTGAAAGCTATAGAGTAAGCTGATGATCATCCGAATGGAATCATTT TCCTAAGTTTGGCTTTGTGCTGTTGGTGTTTACTTTCATCACCTGTGTATGTATTTCATCTGTTTGTTTGAGTTGTGTTCTACATTCTTCCAAGTTTGTA AATTAAATGTATTGTTAGAGTACACTCTGATGTAATGCAACCCTTGCCAAATAGAGAAAGCTTTACCACTTTTTGTTGTTATTTTGTTTTCTTGTGATCA TAGATGTTTGTGTAGCACATTCATTTATTGTATCATTAGGTTTCTTATGACAGCATCTTGTGGGGCTTTCAAAATTTGATGTATCTTTTTTATGCTTTAT GCACCTGATCTTAATTATGCTGCAGCTTTTGTCTCTGGTCTCATCTTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_186339; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_410463
| Blastp | LIMR family protein At3g08930 from Arabidopsis with 85.08% of identity |
|---|---|
| Blastx | LIMR family protein At3g08930 from Arabidopsis with 85.08% of identity |
| Eggnog | LIMR family(ENOG410XRDU) |
| Kegg | Link to kegg annotations (AT3G08930) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461870.1) |
| Pfam | LMBR1-like membrane protein (PF04791.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |