Ll_transcript_410453

• Id Trinity: TRINITY_DN51613_c0_g1_i3
• Name Transcript: Ll_transcript_410453
• Sequence: AGACAACCTGGTTTGAATTCCAAGTGCCCCACCATAATTCCACCTAAAATTACATCTATACCCAAAGAAGTTACTCCCCTTATTTCAGTTAACAAGGACA AAAATGTATTTTCACCTCACCCATCAAAATCATTACCACTAACCGTAGCAAACCACCACCGGAGAGAAAAAACATTTCCCTTTCATTTTCTTCCCTCTTT CTCGATCTAACAACATTAAACCCTAACCCTAATTCCCGATTCAATTTCCCACTCACTTCCGCGATTCGATCATCGAATCTTGGAATCGACATGGGCGATT TCAACCTCGCCCTTGTAATCGTAGCTATTGTGGTTTGCATCATCGTGTTCCTCTTCAACGTGTACCTTCTCGTCAATTACCAGCACCCTGATGATGTCAA CCAAGCCTATTTCCCCAAATTCGTCGTCGTTTTTGGTCTCTCAATCGCCGCCATTTCGATTCTCATGCTCCCCGCCGATGTCGCAAATCGGCAGGCATGT CGCCACGCGATCTATAACGGCGCGTGTAATCTCACGCTCCCTATGAAGACCCTCTGGCTTGCTATTTATATCGTCGATGCCGTCCTCGTCTTTTTTGTCA TTCCCTTTGCCATGTTCTACTATGAAGGGGACCAAGACAAGAGTATTGGGAAGAGGATTAAGAGTGCATTGTTGTGGATGGTGACGACGGCGATAGTATG TGCTCTAATTCTCGGTATTCTGTATGGGCTCATTGGGAAGGTGGACTTTACTGTTAGGCATCTATCTTCATCCACAACTTCATTTCCTAGTTCATGGGGG GACTTAAACAGTGGTCAACAATGTATTGGTGGCAGTGGAGTACATCAGTGCTCAGCATACTCTGCTAGTCCCTCATCAGAGAAAACATGGACCATGCGTG CTACTTTTCCAGAATATGTTGTTGCTCTTGCTACTATTGTTGGATCTGTGCTTTTCTCTATATTTGGTGGCGTTGGCATTGCTTGTCTTCCACTGGGACT AATATTTTCATTTATCCGGCGTCCAAAGGCTGTTATTACTCGCTCACAGTATATCAAGGAAGCAACTGAGCTGGGTAAAAAAGCAAAAGAACTGAAGAAA GTTGCTCAATCACTCCATCAGGAAGAAAGAAGTGGTTCAAAGGGTAGAAAGTTTCGTAAAAATGTAAAGGAAGTAGAAAAGGAATTGTTTCAATTAGAAG AAGACGTAAAGCTTCTTGAAGAGATGTATCCACAAGGGGAAAAGGCTGAGACATCATGGGCAATAACAGTTATCGGTTATATGGCAAAACTTGTTTTGGG AATTTTAGGGTTGATTGTTTCAGTGGCTTGGGTTGCTCATATCATTATCTATCTATTAATTGATCCTCCACTTTCTCCTTTCTTGAATGAAGTTTTTGTC AAGCTAGATAGTGTATGGGGCCTTCTCGGCACAGCGGCATTTGCATTTTTCTGCTTCTACCTTCTCCTTGCTGTGATTGCTGGTGCCATGATGGTTGGGC TGAGACTAGTTTTTGTTACTATACATCCGATGAAGTGGGGAGGGACTCTGATGAATTCTTTTCTGTTCAATGTGGGCCTTATCCTTCTTTCTTCAATTAG TGTGATCCAGTTCTGTTCCACCGCATTTGCCTACTATGCTCAAGCTACTGCTGCACAGGAAATATTTGGCCATACTTTGGAGTCTCTTCGTGGAATTAAA TATTTGTACAAGTACAATGTATTTCAGATTGCATTTGTTGCTTTTGCTGGATTAACCTTTGTATATTATGCTGCCTTCGGATGGAGAAGAAAAAAGCCTA GTGGCAGGTTTCAGTTATCCACATGAGGCATGACTTATCCTGGAAGAGTGTATTATTTGGGGAAAACCATCAGAGAATACTTGTCTCATCATATCCATTA AAAGTGATCTTTTTATATATTGATGATGTTTTGGCCTAGTTTTGTTTCATGTTGAAAGCTATAAGTAAAAGCTGATCCATCATGATCTGAGTAGAGAATC ATTTTTCTGGGGTGAAATCATTATTTGGGGTGCTTGTGTTTGCCTCTTTCATTACCTGTGTATTACTTTGTTTGATTTGTGTTCTACATTCTTCCAAGTA TGTAAATTAAAGGTATCATTACAAGCACAATGCAATTCTTGCCAAGTAAAAAGTTGTACCACCACTTTTTCTAAATTGTTATATTTGTTTTCTTATGTTC ATGTCTGTGTACCACATTTTTTGTATTATGAGGGAAAAAATGTATATATTGTGTAATCATGAATAAAGAAAGTATTAAATATATCAGTAAATGTATTTAA T
• Tissue: pods
• Gene name: LI_gene_186339;
• Additional information: details;

Expression of Ll_transcript_410453

FPKM

• PAB: 8.5
• PNAB: 10.4
• PS1: 11.5
• PS2: 10.4
• PS3: 13.1
• PW1: 11
• PW2: 13.8
• PW3: 8.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_410453

• Blastp: LIMR family protein At5g01460 from Arabidopsis with 84.74% of identity
• Blastx: LIMR family protein At3g08930 from Arabidopsis with 84.34% of identity
• Eggnog: LIMR family(ENOG410XRDU)
• Kegg: Link to kegg annotations (AT5G01460)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461870.1)
• Pfam: LMBR1-like membrane protein (PF04791.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;