Ll_transcript_408360

• Id Trinity: TRINITY_DN51614_c2_g2_i5
• Name Transcript: Ll_transcript_408360
• Sequence: GGGAAAGCCCGCGAATATTTCCAGCCACAATACACAATACATAACATTTCATTTTCATTTAAAACAATTTTAATTATAAATTTCTTAATTCTCACAACAC TAAAACACACACACTTTCAGTTTAACTATGGAACCCTAATTTCAGCAATGCCTGAAATCTTCGATCAACTCCACAATAAGTTCCCAGATCTTAAACTAGA TTCTAAGCAAGCACAATGGTTTCTATCATGATTCATCAACCAAGACCCTACCTAATTCATAACTTTTTTCCTTCAAATCTCGGGTGAAGGAGATGCAATA TTTGGTAAGTCATCAAGCTCACTGTCATCGTCTGAGGGCATTTCTATTAGGTAGGTTGCTTTAAACTCCTCGTCAGTAATATCAGAAAATGTGTTCAAAC CAATTGGGCCGCTTGAAGATGAATTTCTATTTGCATTATATTCTATGATATAGTTCAAATTGGATACGAATACTACAAACTTCTTTGCCATTTCTTCATT GTCTTTGTAAACTCGTTCATGTTGTATCTTCCAATCTTTGAATAGTTGGATAACTTCCTCTTGTGATAGATTTTTGTCTAGCAACATAGTGTTGACTGGT GTTGGTGACTTGGGATAGTATAACTTGAAGAGTGTTATGAATGTAGTGCAGATGAAGAAAACAAGGAATACCTTGAGACTATATAACTTGCAGAGTGTTA TTAATATAGTGGAGATGAAGAAAATGAGGAATAACTTGGAAGAATATGAAATCATTATTATTTTGATGATTGATTGAGTTAATAACCAATGTTTCATATG TGTTCCTCTTCCCCAATTACTGTATTTATAGGAAGGGATGACATATATAACCAAATAGGTGTGTTCTAACCTGAATTTAAGCTAGAAAATAGTTTTTAAT GACTAATAAAAGTTGGGAGGGGA
• Tissue: pods
• Gene name: LI_gene_186349;
• Additional information: -

Expression of Ll_transcript_408360

FPKM

• PAB: 0.3
• PNAB: 0.9
• PS1: 0.4
• PS2: 0.6
• PS3: 1.2
• PW1: 0.7
• PW2: 0.8
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_408360

• Blastp: P34 probable thiol protease from Soja with 47.62% of identity
• Blastx: P34 probable thiol protease from Soja with 48.72% of identity
• Eggnog: cathepsin(COG4870)
• Kegg: Link to kegg annotations (548062)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454619.1)
• Pfam: Cathepsin propeptide inhibitor domain (I29) (PF08246.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;