| Id Trinity | TRINITY_DN51617_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_410624 |
| Sequence | GTTTTAAATAAAATTGCATTTGTAACAATTATCTTCCTTTTTGGAATTAGGGTTTGTCTTAGCCTTAGGCAGTCTCTCTCTTACACACTCTCACTTCGCT CTTCCACACCTCATCTTCTTCCCCGCCGTATACCCTATTCTCCGGCCACCTTTATCCGCCGCAGCTTCTTCCCCTCCGATCACGAAAGCTTTGAGCTTCT TTCAGATAATTTAGCATTGAATATTTATAAAGTCATATACTATTCAAAATGGCGCGGAAGGGTTTGATGGAACAGGATCTGAAAAAATTGGATGTGACAA AATTGCATCCACTTTCTCCTGAAGTCATATCTCGGCAGGCTACCATTAATATTGGCACCATAGGTCATGTGGCACATGGTAAGTCAACAGTTGTGAAAGC AATATCAGGTGTTCAGACTGTGCGCTTTAAAAATGAATTGGAGAGGAACATCACAATCAAGCTTGGCTATGCAAATGCGAAGATATACAAGTGTGAAGAT GAACGGTGTCCAAGGCCTATGTCCTACAAGGCATATGGGAGTGGAAAGGAAGATGCTCCTCTGTGTGATGTGCTGGGGTTTGAAAACTGCAAAATGAAAT TGCTGCGACATGTTTCTTTTGTGGATTGCCCGGGACATGATATTCTCATGGCTACAATGCTTAATGGAGCAGCTATCATGGATGGAGCTTTGCTACTCAT AGCTGCTAATGAGAGTTGCCCACAACCACAAACCTCTGAGCATTTAGCTGCTGTGGAAATTATGCGGCTACAGCACATAATAATCCTTCAGAACAAGGTA GACCTGATTCAAGAAAATGTTGCAATCAATCAGCATGAAGCAATCCAGAAGTTCATACAAGGAACTGTTGCTGATGGTGCACCAGTAGTACCTATTTCAG CACAACTGAAGTATAATATTGATGTCGTATGTGAGTATATCGTGAAAAAGATCCCAATTCCTGAAAGGAACTTCATCTCTCCCCCTAATATGATTGTTAT TCGGTCATTTGATGTCAATAAACCTGGGTTTGAGGTTGATGATATTAAAGGAGGTGTAGCTGGTGGAAGCATTCTAAGGGGTGTTTTGAAGGTCAATCAA TTCATTGAAGTTCGACCTGGTATAGTTGTTAAAGACGAGGTTGGAAATATCAAATGCACACCCATATACTCTAGAATAGTTTCACTGTTTGCTGAACAAA ATGAGCTTCAGTTTGCTGTGCCTGGAGGGTTAATTGGTGTTGGGACAACGATGGATCCCACTTTGACACGGGCTGATAGGTTAGTTGGGCAAGTTCTTGG AGCGGTTGGATCATTGCCTGAGGTTTTTGTTGAGCTTGAGGTAAACTTTTTCTTGCTTCGGCGGCTTCTAGGTGTCCGGACAAAAGGCACCGAGAGACAG GGAAAGGTATCTAAACTGGCTAAAGGAGAGATGCTAATGTTGAACATTGGATCAATGTCAACTGGGGCCAGAGTTGTTGCTGTGAAGAATGATTTGGCCA AGTTGCAACTTACTTCCCCTGTATGCACTAGCAAGGGCGAGAAGATCGCGCTTAGTCGACGTGTTGAGAAGCACTGGCGTCTTATTGGGTGGGGTCAAAT CCAAGCAGGAATCACTCTAGATGTTCCTAGTGCCCCCTTTTCAGTTGCAGACATAGTAGAATAGACAAAGAAGAAACCCTTGTTACAAAATTGAGAGAGG AATTTAGAGATGTGGGAAGGGAGACAATTGTTGGGAACCATTTTTTTGAGGTGGAGAAGAAAACGTTTGGTTTGTCCAATTTTTGTTCTACATTATTTGG TTTTTATCCCTGTCTACTTACTATATAAGTTTTATCTTAATGTCGATTGAGTTTAGGTTGGGGTGAGCATATCAACGAGTACGTGTTGATTTCAATGGTT ACACAGTAAGCGTTACTGTTCAGGCATATATGATGCATTCCTTACTCCTTTTTGAACAGTGCTTGAAGCTCTTCTTGTGATGAATGTGTTGTGACTGTTC TAGTATAGGTAAAGATGAGATTACAGAAAGGTTTATGCAATGTTAAGTAATGGGATGCAGACATTAAATTGAAAGAGTATGATTGCATATAATATATGAA AATAAAGAATCTCAGATAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_186360; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_410624
| Blastp | Eukaryotic translation initiation factor 2 subunit 3 from Sophophora with 74.12% of identity |
|---|---|
| Blastx | Eukaryotic translation initiation factor 2 subunit 3 from Sophophora with 74.12% of identity |
| Eggnog | translation initiation factor(COG5257) |
| Kegg | Link to kegg annotations (Dmel_CG43665) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461644.1) |
| Pfam | Elongation factor Tu GTP binding domain (PF00009.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |