Id Trinity | TRINITY_DN51617_c0_g1_i5 |
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Name Transcript | Ll_transcript_410628 |
Sequence | CTCAATTCGACAAGTTACAAGCTAACAACCGTAAAACTACAAGCTCATAGCTACACACTACAAGCTCATAGTTACAACCTCGTAGCTATAAGCTATTTTC AAAACAATGTGATAGAATATATCAGAAAAATAATTTTAAAAAATACTAAAAATAACTAACGTAACTTTTATTTAATATATTTTAGTCTCATTTTGAATAA ATGAATTTGATGCAAATATTTTGAGTGGCACAAAATGAATTTTGACTCAAAATGAATATGTAATATTGTAATTTTCTCTTTTGTAGAATTAGGGTTTGTC ACTCTTTACCCTTGCCTTAGCCTCACGCAGTCTACGGCTCTCACACTCACACTTCCCTCTCACACACTTCATCTGCACCGTCCCTCTTCCTCCCCGCCGT TGATTCTCGCTCCGGCCACCTTAATCCGCCGTAGCTGCCACCCCTCCACCTTCTTTCAGATAGTTTAGCATCAAATATTTGTAAAGTCATAAAACACTTG CAAAATGGCACGGAAGGGTTTGATGGAACAAGACCTGAAAAAATTGGATGTCACAAAATTGCATCCACTTTCTCCTGAAGTCATATCTCGGCAAGCTACC ATTAATATTGGCACCATAGGTCATGTGGCACATGGTAAGTCAACAGTTGTGAAAGCAATATCAGGCGTTCAGACTGTACGTTTTAAAAATGAGTTGGAGA GGAATATTACAATCAAGCTTGGCTATGCAAATGCAAAGATATATAAGTGTGAAGATGAACGGTGTCCAAGGCCTCTGTCCTATAAGGCTTATGGGAGTGG AAAGGAAGATGCTCCTATGTGTGATGCACCGGGGTTTGAGAACTGCAAAATGAAATTGCTAAGACATGTTTCTTTTGTAGATTGCCCGGTAATGTCCTAA ACTGTCATTTGGTAGTTAGTGTTTCTTTTCTATACCATAATTTCATCAAATTTTGTATATTGTTTAGGATTTACTTTAATATACCTGCCATTGGCTTTAC ATTGTTTTTGTCCCTTTAAAGTTCAACCCCTCTCCTTAGCATATTCTCTCCCAGTTCTTTTAGCATCATGTACCCAAATGTTTGGATCAAAAACCCATAT TTTATTATGCTCACACAACTTCATTTCCAGGGTATTTCAGACAATTTATATTATTTTGTTTTAAAACATTTATTGTATTTTGCTATACGAGGAAGAAATT GAATAATATTTGAAGAAGAAAAGTTAAATAATTAATGAGTGGGACAAGATGTTAAAAGAGATTTTATTGACATACCAATCAATCATGTGAAGTATATCTG AGTTCTAACATCTAACATTTCATATAATTATTTCAGTACTAAACATTGCACATGATTACAGCTGTGATATATATTTTAAGTTTTTGCATGATTAAATGTT ATCCAGATTATACTCATAGCATGTGTTGCATTTTATTTATGATAAGCAGCAAGCATTGCGTTAACTGAAAAATTGCACTCAGTATATTTAATTTCTAAGA ACATCCAACTATTTTCAGAAAGAAGAAAATATATAACTATAATCAAGGGGCTTTGGTTGTATGAACCGTTCCTTTTGCATTTTAGTAGGAACTAGTTAAA CAACTGTTACCAAGAATTGATTTGTGTTTTAGAATGCCATTTTTAAAACCAGTTTAAAAGATTCTTGTTTGGTTTGTGAAGCAACTAGTATAATCACTGT TAGAATATAAAATCATGATTCATGGATATGTTTTTCAAATATTCTACATGATGCATTTGCTATATGAGGAAGAAGATGAATAGTATTTGAAGAAGAAAAG TTAAGTAATTAATGATGAGACCAGATGCGAAGAGAGAGAAAATACAATAAATGTTTTAAAAATAAAATAATATAATTGTCTGAAATACCCTTGAAATGAA CTTGTGTGAGCATAGTAAAATCTGGGTTTTGGTCCAAATATTTGGGTACACAATGCTAACATGATCCTTCATGAAAACAACTTGACTCATGTTAGTGAAC CTCTATATATGTATAGATATACATATTGTTGGGTGTATACCATTTGACATTTTTTGTTGTCATATGTTGCAAGATTTTCATGTTTCAATGTGTATCTTTA TACTGTTCAGTTAGTTACTGGCCACCAATCCATGTTATATCATTCAATATTTCGATATATATTTAGTATGATTACTTTTACAACTATATGATATCTATTT TTGCTTGTACGATTTCCTTAGGGACATGATATTCTCATGGCTACAATGCTTAATGGAGCAGCAATCATGGACGGAGCTTTGCTACTCATAGCTGCTAATG AGAGTTGCCCACAACCACAAACCTCTGAGCATTTAGCTGCTGTGGAAATTATGCGGCTGCAGCATATAATAATCCTTCAGAACAAGGTAGACCTGATTCA AGAAAATGTGGCAATCAATCAGCATGAAGCAATTCAGAAGTTCATCCAAGGAACTGTTGCTGATGGTGCACCAGTAGTACCTATTTCAGCACAACTGAAG TATAATATTGATGTCGTATGTGAGTATATCGTGAAAAAGATCCCAATTCCTGAAAGGAACTTCATCTCTCCCCCTAATATGATTGTTATTCGGTCATTTG ATGTCAATAAACCTGGGTTTGAGGTTGATGATATTAAAGGAGGTGTAGCTGGTGGAAGCATTCTAAGGGGTGTTTTGAAGGTCAATCAATTCATTGAAGT TCGACCTGGTATAGTTGTTAAAGACGAGGTTGGAAATATCAAATGCACACCCATATACTCTAGAATAGTTTCACTGTTTGCTGAACAAAATGAGCTTCAG TTTGCTGTGCCTGGAGGGTTAATTGGTGTTGGGACAACGATGGATCCCACTTTGACACGGGCTGATAGGTTAGTTGGGCAAGTTCTTGGAGCGGTTGGAT CATTGCCTGAGGTTTTTGTTGAGCTTGAGGTAGGTGGCCATGTCTAACTGTTTATTAATTTATGTGCATCTACCATAAAATTTGGGTTGTCAATCACCTT GCTATGTTTTGGAGTTCATAAGTGTGGATAAAGAGCTTACTTTTCATGATATCTATATCCACCACTTTTCACAATATGGTCTTGCAGGTAAACTTTTTCT TGCTTCGGCGGCTTCTAGGTGTCCGGACAAAAGGCACCGAGAGACAGGGAAAGGTATCTAAACTGGCTAAAGGAGAGATGCTAATGTTGAACATTGGATC AATGTCAACTGGGGCCAGAGTTGTTGCTGTGAAGAATGATTTGGCCAAGTTGCAACTTACTTCCCCTGTATGCACTAGCAAGGGCGAGAAGATCGCGCTT AGTCGACGTGTTGAGAAGCACTGGCGTCTTATTGGGTGGGGTCAAATCCAAGCAGGAATCACTCTAGATGTTCCTAGTGCCCCCTTTTCAGTTGCAGACA TAGTAGAATAGACAAAGAAGAAACCCTTGTTACAAAATTGAGAGAGGAATTTAGAGATGTGGGAAGGGAGACAATTGTTGGGAACCATTTTTTTGAGGTG GAGAAGAAAACGTTTGGTTTGTCCAATTTTTGTTCTACATTATTTGGTTTTTATCCCTGTCTACTTACTATATAAGTTTTATCTTAATGTCGATTGAGTT TAGGTTGGGGTGAGCATATCAACGAGTACGTGTTGATTTCAATGGTTACACAGTAAGCGTTACTGTTCAGGCATATATGATGCATTCCTTACTCCTTTTT GAACAGTGCTTGAAGCTCTTCTTGTGATGAATGTGTTGTGACTGTTCTAGTATAGGTAAAGATGAGATTACAGAAAGGTTTATGCAATGTTAAGTAATGG GATGCAGACATTAAATTGAAAGAGTATGATTGCATATAATATATGAAAATAAAGAATCTCAGATAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_186360; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_410628
Blastp | Eukaryotic translation initiation factor 2 subunit 3 from Sophophora with 75.85% of identity |
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Blastx | Eukaryotic translation initiation factor 2 subunit 3 from Sophophora with 76.35% of identity |
Eggnog | translation initiation factor(COG5257) |
Kegg | Link to kegg annotations (Dmel_CG43665) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461644.1) |
Pfam | Elongation factor Tu GTP binding domain (PF00009.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |